Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
TPM3P06753 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.23■■□□□ 1.47
TPM3P06753 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.23■■□□□ 1.47
TPM3P06753 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TPM3P06753 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
TPM3P06753 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TPM3P06753 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.23■■□□□ 1.47
TPM3P06753 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TPM3P06753 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TPM3P06753 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.22■■□□□ 1.47
TPM3P06753 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TPM3P06753 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TPM3P06753 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
TPM3P06753 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TPM3P06753 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
TPM3P06753 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TPM3P06753 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TPM3P06753 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TPM3P06753 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
TPM3P06753 FP325331.1-202ENST00000623531 1380 ntBASIC24.21■■□□□ 1.47
TPM3P06753 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TPM3P06753 NTF6A-201ENST00000591175 560 ntBASIC24.21■■□□□ 1.47
TPM3P06753 SNX5-217ENST00000606557 1087 ntBASIC24.21■■□□□ 1.47
TPM3P06753 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.21■■□□□ 1.47
TPM3P06753 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TPM3P06753 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.21■■□□□ 1.47
TPM3P06753 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.21■■□□□ 1.47
TPM3P06753 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TPM3P06753 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC24.21■■□□□ 1.47
TPM3P06753 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
TPM3P06753 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
TPM3P06753 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TPM3P06753 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TPM3P06753 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
TPM3P06753 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
TPM3P06753 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
TPM3P06753 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TPM3P06753 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
TPM3P06753 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TPM3P06753 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.2■■□□□ 1.46
TPM3P06753 ABHD17AP5-201ENST00000580133 923 ntBASIC24.2■■□□□ 1.46
TPM3P06753 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
TPM3P06753 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
TPM3P06753 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.2■■□□□ 1.46
TPM3P06753 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.2■■□□□ 1.46
TPM3P06753 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
TPM3P06753 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.19■■□□□ 1.46
TPM3P06753 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TPM3P06753 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TPM3P06753 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TPM3P06753 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.19■■□□□ 1.46
TPM3P06753 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TPM3P06753 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.19■■□□□ 1.46
TPM3P06753 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TPM3P06753 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.19■■□□□ 1.46
TPM3P06753 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
TPM3P06753 LINC01960-201ENST00000563759 1884 ntBASIC24.19■■□□□ 1.46
TPM3P06753 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
TPM3P06753 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TPM3P06753 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
TPM3P06753 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TPM3P06753 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TPM3P06753 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.18■■□□□ 1.46
TPM3P06753 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.18■■□□□ 1.46
TPM3P06753 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TPM3P06753 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.18■■□□□ 1.46
TPM3P06753 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC24.18■■□□□ 1.46
TPM3P06753 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TPM3P06753 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
TPM3P06753 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TPM3P06753 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
TPM3P06753 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TPM3P06753 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TPM3P06753 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TPM3P06753 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TPM3P06753 AC009086.3-201ENST00000623486 1008 ntBASIC24.17■■□□□ 1.46
TPM3P06753 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TPM3P06753 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TPM3P06753 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TPM3P06753 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TPM3P06753 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TPM3P06753 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TPM3P06753 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
TPM3P06753 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
TPM3P06753 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TPM3P06753 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.16■■□□□ 1.46
TPM3P06753 PVT1_1.1-201ENST00000615125 194 ntBASIC24.16■■□□□ 1.46
TPM3P06753 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TPM3P06753 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TPM3P06753 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TPM3P06753 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
TPM3P06753 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
TPM3P06753 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TPM3P06753 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TPM3P06753 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
TPM3P06753 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TPM3P06753 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.15■■□□□ 1.46
TPM3P06753 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.15■■□□□ 1.46
TPM3P06753 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.15■■□□□ 1.46
TPM3P06753 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms