Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dnmt3aO88508 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Dnmt3aO88508 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3aO88508 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Dnmt3aO88508 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.23■□□□□ 0.67
Dnmt3aO88508 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3aO88508 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3aO88508 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3aO88508 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3aO88508 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dnmt3aO88508 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Dnmt3aO88508 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.21■□□□□ 0.67
Dnmt3aO88508 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dnmt3aO88508 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Gm27801-201ENSMUST00000184174 223 ntBASIC19.2■□□□□ 0.66
Dnmt3aO88508 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.2■□□□□ 0.66
Dnmt3aO88508 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.2■□□□□ 0.66
Dnmt3aO88508 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dnmt3aO88508 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Dnmt3aO88508 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.18■□□□□ 0.66
Dnmt3aO88508 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.17■□□□□ 0.66
Dnmt3aO88508 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Dnmt3aO88508 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnmt3aO88508 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnmt3aO88508 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dnmt3aO88508 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnmt3aO88508 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnmt3aO88508 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnmt3aO88508 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnmt3aO88508 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dnmt3aO88508 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnmt3aO88508 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnmt3aO88508 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Dnmt3aO88508 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms