Protein–RNA interactions for Protein: O55106

Strn, Striatin, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrnO55106 Gm20049-201ENSMUST00000219950 730 ntBASIC21.21■□□□□ 0.99
StrnO55106 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
StrnO55106 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
StrnO55106 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
StrnO55106 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
StrnO55106 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
StrnO55106 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrnO55106 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
StrnO55106 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrnO55106 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
StrnO55106 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
StrnO55106 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
StrnO55106 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
StrnO55106 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrnO55106 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
StrnO55106 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrnO55106 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrnO55106 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrnO55106 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrnO55106 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
StrnO55106 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
StrnO55106 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.18■□□□□ 0.98
StrnO55106 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
StrnO55106 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
StrnO55106 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
StrnO55106 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
StrnO55106 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
StrnO55106 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
StrnO55106 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.17■□□□□ 0.98
StrnO55106 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
StrnO55106 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
StrnO55106 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
StrnO55106 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
StrnO55106 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.17■□□□□ 0.98
StrnO55106 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
StrnO55106 Gm7860-201ENSMUST00000121190 879 ntBASIC21.16■□□□□ 0.98
StrnO55106 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.16■□□□□ 0.98
StrnO55106 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.16■□□□□ 0.98
StrnO55106 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
StrnO55106 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
StrnO55106 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
StrnO55106 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.16■□□□□ 0.98
StrnO55106 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
StrnO55106 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.16■□□□□ 0.98
StrnO55106 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrnO55106 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrnO55106 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
StrnO55106 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrnO55106 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.15■□□□□ 0.98
StrnO55106 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
StrnO55106 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
StrnO55106 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrnO55106 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
StrnO55106 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
StrnO55106 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
StrnO55106 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
StrnO55106 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.14■□□□□ 0.97
StrnO55106 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.14■□□□□ 0.97
StrnO55106 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
StrnO55106 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.14■□□□□ 0.97
StrnO55106 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.14■□□□□ 0.97
StrnO55106 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
StrnO55106 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
StrnO55106 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
StrnO55106 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
StrnO55106 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
StrnO55106 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
StrnO55106 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
StrnO55106 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.13■□□□□ 0.97
StrnO55106 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.12■□□□□ 0.97
StrnO55106 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
StrnO55106 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
StrnO55106 Gm13168-201ENSMUST00000121771 632 ntBASIC21.12■□□□□ 0.97
StrnO55106 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
StrnO55106 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
StrnO55106 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.12■□□□□ 0.97
StrnO55106 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms