Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
BckdkO55028 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BckdkO55028 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BckdkO55028 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BckdkO55028 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BckdkO55028 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.75■□□□□ 0.43
BckdkO55028 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.75■□□□□ 0.43
BckdkO55028 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.75■□□□□ 0.43
BckdkO55028 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
BckdkO55028 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.75■□□□□ 0.43
BckdkO55028 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
BckdkO55028 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
BckdkO55028 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BckdkO55028 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BckdkO55028 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BckdkO55028 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BckdkO55028 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BckdkO55028 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BckdkO55028 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
BckdkO55028 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.74■□□□□ 0.43
BckdkO55028 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BckdkO55028 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
BckdkO55028 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
BckdkO55028 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BckdkO55028 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BckdkO55028 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BckdkO55028 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BckdkO55028 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BckdkO55028 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BckdkO55028 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BckdkO55028 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.73■□□□□ 0.43
BckdkO55028 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BckdkO55028 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BckdkO55028 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BckdkO55028 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BckdkO55028 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.72■□□□□ 0.43
BckdkO55028 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.72■□□□□ 0.43
BckdkO55028 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BckdkO55028 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.72■□□□□ 0.43
BckdkO55028 Gm11421-201ENSMUST00000122124 294 ntBASIC17.72■□□□□ 0.43
BckdkO55028 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BckdkO55028 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BckdkO55028 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.72■□□□□ 0.43
BckdkO55028 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BckdkO55028 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BckdkO55028 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BckdkO55028 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BckdkO55028 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BckdkO55028 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BckdkO55028 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.71■□□□□ 0.43
BckdkO55028 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.71■□□□□ 0.43
BckdkO55028 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
BckdkO55028 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BckdkO55028 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BckdkO55028 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BckdkO55028 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BckdkO55028 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
BckdkO55028 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BckdkO55028 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BckdkO55028 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BckdkO55028 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BckdkO55028 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BckdkO55028 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BckdkO55028 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BckdkO55028 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BckdkO55028 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BckdkO55028 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
BckdkO55028 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BckdkO55028 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BckdkO55028 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BckdkO55028 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.69■□□□□ 0.42
BckdkO55028 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.69■□□□□ 0.42
BckdkO55028 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.69■□□□□ 0.42
BckdkO55028 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.69■□□□□ 0.42
BckdkO55028 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.69■□□□□ 0.42
BckdkO55028 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
BckdkO55028 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BckdkO55028 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms