Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa8J3QNX5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Grk6-206ENSMUST00000224995 2971 ntBASIC17.48■□□□□ 0.39
Shisa8J3QNX5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Etf1-202ENSMUST00000180351 108 ntBASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa8J3QNX5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa8J3QNX5 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.46■□□□□ 0.39
Shisa8J3QNX5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa8J3QNX5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.46■□□□□ 0.39
Shisa8J3QNX5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa8J3QNX5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa8J3QNX5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.46■□□□□ 0.39
Shisa8J3QNX5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa8J3QNX5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Shisa8J3QNX5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa8J3QNX5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shisa8J3QNX5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shisa8J3QNX5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Shisa8J3QNX5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.45■□□□□ 0.38
Shisa8J3QNX5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa8J3QNX5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
Shisa8J3QNX5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.43■□□□□ 0.38
Shisa8J3QNX5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa8J3QNX5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms