Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav17A0A075B655 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.25■□□□□ 0.03
Trav17A0A075B655 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav17A0A075B655 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.24■□□□□ 0.03
Trav17A0A075B655 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav17A0A075B655 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Trav17A0A075B655 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav17A0A075B655 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.23■□□□□ 0.03
Trav17A0A075B655 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.23■□□□□ 0.03
Trav17A0A075B655 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav17A0A075B655 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.22■□□□□ 0.03
Trav17A0A075B655 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav17A0A075B655 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.21■□□□□ 0.03
Trav17A0A075B655 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav17A0A075B655 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav17A0A075B655 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav17A0A075B655 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav17A0A075B655 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav17A0A075B655 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms