Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 AA386476-201ENSMUST00000098781 1665 ntBASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9n-4A0A075B631 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Gm45102-201ENSMUST00000207427 857 ntBASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9n-4A0A075B631 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9n-4A0A075B631 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9n-4A0A075B631 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav9n-4A0A075B631 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.08□□□□□ -0.31
Trav9n-4A0A075B631 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9n-4A0A075B631 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9n-4A0A075B631 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms