Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb1S4R1E0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Gm45102-201ENSMUST00000207427 857 ntBASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.41■□□□□ 0.38
H2afb1S4R1E0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb1S4R1E0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
H2afb1S4R1E0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
H2afb1S4R1E0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb1S4R1E0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.39■□□□□ 0.37
H2afb1S4R1E0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb1S4R1E0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb1S4R1E0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb1S4R1E0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb1S4R1E0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb1S4R1E0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.39■□□□□ 0.37
H2afb1S4R1E0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Gm14117-201ENSMUST00000122417 843 ntBASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb1S4R1E0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1S4R1E0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
H2afb1S4R1E0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1S4R1E0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1S4R1E0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
H2afb1S4R1E0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
H2afb1S4R1E0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1S4R1E0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1S4R1E0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb1S4R1E0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb1S4R1E0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H2afb1S4R1E0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms