Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Raf1Q99N57 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Raf1Q99N57 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Raf1Q99N57 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Raf1Q99N57 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.18■□□□□ 0.34
Raf1Q99N57 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.18■□□□□ 0.34
Raf1Q99N57 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Raf1Q99N57 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raf1Q99N57 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raf1Q99N57 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Raf1Q99N57 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Raf1Q99N57 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raf1Q99N57 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.18■□□□□ 0.34
Raf1Q99N57 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Raf1Q99N57 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Raf1Q99N57 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raf1Q99N57 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Rarb-207ENSMUST00000225921 2756 ntBASIC17.16■□□□□ 0.34
Raf1Q99N57 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Raf1Q99N57 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Raf1Q99N57 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Raf1Q99N57 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.15■□□□□ 0.34
Raf1Q99N57 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raf1Q99N57 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Raf1Q99N57 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raf1Q99N57 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raf1Q99N57 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raf1Q99N57 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.15■□□□□ 0.34
Raf1Q99N57 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.15■□□□□ 0.34
Raf1Q99N57 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raf1Q99N57 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raf1Q99N57 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Raf1Q99N57 Gm8495-201ENSMUST00000188740 694 ntBASIC17.15■□□□□ 0.34
Raf1Q99N57 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Raf1Q99N57 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Raf1Q99N57 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raf1Q99N57 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Raf1Q99N57 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Raf1Q99N57 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Raf1Q99N57 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.14■□□□□ 0.33
Raf1Q99N57 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.14■□□□□ 0.33
Raf1Q99N57 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.14■□□□□ 0.33
Raf1Q99N57 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.14■□□□□ 0.33
Raf1Q99N57 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Raf1Q99N57 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raf1Q99N57 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Raf1Q99N57 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raf1Q99N57 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Raf1Q99N57 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.13■□□□□ 0.33
Raf1Q99N57 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raf1Q99N57 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raf1Q99N57 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raf1Q99N57 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raf1Q99N57 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms