Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SLC44A1Q8WWI5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.81■■□□□ 1.08
SLC44A1Q8WWI5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC44A1Q8WWI5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC44A1Q8WWI5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC44A1Q8WWI5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SLC44A1Q8WWI5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 AL499627.2-201ENST00000606283 725 ntBASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SLC44A1Q8WWI5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC44A1Q8WWI5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC44A1Q8WWI5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC44A1Q8WWI5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC44A1Q8WWI5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC44A1Q8WWI5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC44A1Q8WWI5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC44A1Q8WWI5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC44A1Q8WWI5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC44A1Q8WWI5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC44A1Q8WWI5 MTDHP2-201ENST00000601468 714 ntBASIC21.78■■□□□ 1.08
SLC44A1Q8WWI5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC44A1Q8WWI5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SLC44A1Q8WWI5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SLC44A1Q8WWI5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC44A1Q8WWI5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC44A1Q8WWI5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC44A1Q8WWI5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SLC44A1Q8WWI5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 KRT125P-201ENST00000546827 989 ntBASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 Z92544.1-202ENST00000571933 1220 ntBASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC44A1Q8WWI5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC44A1Q8WWI5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SLC44A1Q8WWI5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
SLC44A1Q8WWI5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC44A1Q8WWI5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC44A1Q8WWI5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 Z98882.1-201ENST00000622160 2253 ntBASIC21.75■■□□□ 1.07
SLC44A1Q8WWI5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC44A1Q8WWI5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms