Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Gm13146-201ENSMUST00000118508 780 ntBASIC21■□□□□ 0.95
Upb1Q8VC97 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21■□□□□ 0.95
Upb1Q8VC97 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21■□□□□ 0.95
Upb1Q8VC97 Ap3s1-204ENSMUST00000225520 957 ntBASIC21■□□□□ 0.95
Upb1Q8VC97 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upb1Q8VC97 Gm20100-201ENSMUST00000209418 2272 ntBASIC21■□□□□ 0.95
Upb1Q8VC97 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21■□□□□ 0.95
Upb1Q8VC97 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Upb1Q8VC97 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21■□□□□ 0.95
Upb1Q8VC97 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21■□□□□ 0.95
Upb1Q8VC97 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21■□□□□ 0.95
Upb1Q8VC97 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Upb1Q8VC97 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Upb1Q8VC97 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upb1Q8VC97 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.99■□□□□ 0.95
Upb1Q8VC97 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Upb1Q8VC97 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upb1Q8VC97 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Upb1Q8VC97 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upb1Q8VC97 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upb1Q8VC97 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Upb1Q8VC97 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Upb1Q8VC97 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.98■□□□□ 0.95
Upb1Q8VC97 Gm7514-201ENSMUST00000209475 934 ntBASIC20.98■□□□□ 0.95
Upb1Q8VC97 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.98■□□□□ 0.95
Upb1Q8VC97 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upb1Q8VC97 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upb1Q8VC97 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upb1Q8VC97 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upb1Q8VC97 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upb1Q8VC97 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.98■□□□□ 0.95
Upb1Q8VC97 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upb1Q8VC97 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Upb1Q8VC97 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upb1Q8VC97 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Upb1Q8VC97 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upb1Q8VC97 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upb1Q8VC97 Gm7860-201ENSMUST00000121190 879 ntBASIC20.97■□□□□ 0.95
Upb1Q8VC97 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Upb1Q8VC97 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upb1Q8VC97 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upb1Q8VC97 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upb1Q8VC97 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.96■□□□□ 0.95
Upb1Q8VC97 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upb1Q8VC97 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Upb1Q8VC97 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upb1Q8VC97 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Upb1Q8VC97 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upb1Q8VC97 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upb1Q8VC97 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Upb1Q8VC97 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upb1Q8VC97 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.95■□□□□ 0.94
Upb1Q8VC97 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.95■□□□□ 0.94
Upb1Q8VC97 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Upb1Q8VC97 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.94■□□□□ 0.94
Upb1Q8VC97 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upb1Q8VC97 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.94■□□□□ 0.94
Upb1Q8VC97 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upb1Q8VC97 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Upb1Q8VC97 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.94■□□□□ 0.94
Upb1Q8VC97 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upb1Q8VC97 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upb1Q8VC97 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upb1Q8VC97 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.92■□□□□ 0.94
Upb1Q8VC97 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.92■□□□□ 0.94
Upb1Q8VC97 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upb1Q8VC97 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.91■□□□□ 0.94
Upb1Q8VC97 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upb1Q8VC97 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upb1Q8VC97 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms