Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rpap2Q8VC34 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpap2Q8VC34 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rpap2Q8VC34 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Rpap2Q8VC34 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.19■□□□□ 0.98
Rpap2Q8VC34 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rpap2Q8VC34 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpap2Q8VC34 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpap2Q8VC34 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpap2Q8VC34 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Rpap2Q8VC34 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpap2Q8VC34 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rpap2Q8VC34 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rpap2Q8VC34 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpap2Q8VC34 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rpap2Q8VC34 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rpap2Q8VC34 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rpap2Q8VC34 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpap2Q8VC34 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpap2Q8VC34 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpap2Q8VC34 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Rpap2Q8VC34 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rpap2Q8VC34 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpap2Q8VC34 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpap2Q8VC34 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rpap2Q8VC34 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Rpap2Q8VC34 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rpap2Q8VC34 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Rpap2Q8VC34 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpap2Q8VC34 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.14■□□□□ 0.97
Rpap2Q8VC34 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rpap2Q8VC34 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpap2Q8VC34 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpap2Q8VC34 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpap2Q8VC34 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpap2Q8VC34 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 179.3 ms