Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MIR4767-201ENST00000582827 78 ntBASIC20.97■□□□□ 0.95
KRT78Q8N1N4 AC010525.1-201ENST00000585559 441 ntBASIC20.97■□□□□ 0.95
KRT78Q8N1N4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 AC137767.1-201ENST00000602918 1920 ntBASIC20.96■□□□□ 0.95
KRT78Q8N1N4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT78Q8N1N4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT78Q8N1N4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT78Q8N1N4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT78Q8N1N4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT78Q8N1N4 SLC47A1P1-202ENST00000449666 945 ntBASIC20.95■□□□□ 0.94
KRT78Q8N1N4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.95■□□□□ 0.94
KRT78Q8N1N4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT78Q8N1N4 AC080038.3-201ENST00000623346 1952 ntBASIC20.95■□□□□ 0.94
KRT78Q8N1N4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT78Q8N1N4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT78Q8N1N4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 PBX2P1-201ENST00000493219 1291 ntBASIC20.94■□□□□ 0.94
KRT78Q8N1N4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 PKD1P6-201ENST00000343738 4769 ntBASIC20.94■□□□□ 0.94
KRT78Q8N1N4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT78Q8N1N4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 BX842568.3-201ENST00000418104 571 ntBASIC20.93■□□□□ 0.94
KRT78Q8N1N4 AC010141.3-201ENST00000456659 717 ntBASIC20.93■□□□□ 0.94
KRT78Q8N1N4 AP005435.1-201ENST00000529293 1178 ntBASIC20.93■□□□□ 0.94
KRT78Q8N1N4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
KRT78Q8N1N4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 AC079834.2-201ENST00000609776 1949 ntBASIC20.92■□□□□ 0.94
KRT78Q8N1N4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 LINC00526-201ENST00000581067 1875 ntBASIC20.92■□□□□ 0.94
KRT78Q8N1N4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 AC139530.1-201ENST00000575312 1977 ntBASIC20.92■□□□□ 0.94
KRT78Q8N1N4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT78Q8N1N4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 AC079089.2-201ENST00000531211 1277 ntBASIC20.91■□□□□ 0.94
KRT78Q8N1N4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 AC106739.1-201ENST00000617035 715 ntBASIC20.91■□□□□ 0.94
KRT78Q8N1N4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT78Q8N1N4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT78Q8N1N4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms