Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf4Q8K4J2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf4Q8K4J2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf4Q8K4J2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf4Q8K4J2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf4Q8K4J2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.58■□□□□ 0.4
Ebf4Q8K4J2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ebf4Q8K4J2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf4Q8K4J2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.58■□□□□ 0.4
Ebf4Q8K4J2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ebf4Q8K4J2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Mir6538-201ENSMUST00000183713 110 ntBASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf4Q8K4J2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf4Q8K4J2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Mir6236-201ENSMUST00000184437 123 ntBASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf4Q8K4J2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf4Q8K4J2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf4Q8K4J2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf4Q8K4J2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ebf4Q8K4J2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ebf4Q8K4J2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms