Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop53Q8BK35 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.61■□□□□ 0.89
Nop53Q8BK35 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop53Q8BK35 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Nop53Q8BK35 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nop53Q8BK35 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nop53Q8BK35 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.6■□□□□ 0.89
Nop53Q8BK35 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.6■□□□□ 0.89
Nop53Q8BK35 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.6■□□□□ 0.89
Nop53Q8BK35 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nop53Q8BK35 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nop53Q8BK35 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop53Q8BK35 AA386476-201ENSMUST00000098781 1665 ntBASIC20.59■□□□□ 0.89
Nop53Q8BK35 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop53Q8BK35 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Nop53Q8BK35 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nop53Q8BK35 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Nop53Q8BK35 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nop53Q8BK35 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nop53Q8BK35 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nop53Q8BK35 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Nop53Q8BK35 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nop53Q8BK35 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nop53Q8BK35 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nop53Q8BK35 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nop53Q8BK35 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nop53Q8BK35 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nop53Q8BK35 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nop53Q8BK35 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nop53Q8BK35 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nop53Q8BK35 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nop53Q8BK35 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nop53Q8BK35 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nop53Q8BK35 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.56■□□□□ 0.88
Nop53Q8BK35 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.56■□□□□ 0.88
Nop53Q8BK35 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nop53Q8BK35 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nop53Q8BK35 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.56■□□□□ 0.88
Nop53Q8BK35 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nop53Q8BK35 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.56■□□□□ 0.88
Nop53Q8BK35 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nop53Q8BK35 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nop53Q8BK35 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nop53Q8BK35 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nop53Q8BK35 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nop53Q8BK35 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nop53Q8BK35 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nop53Q8BK35 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.54■□□□□ 0.88
Nop53Q8BK35 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
Nop53Q8BK35 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nop53Q8BK35 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.53■□□□□ 0.88
Nop53Q8BK35 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nop53Q8BK35 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nop53Q8BK35 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nop53Q8BK35 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nop53Q8BK35 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nop53Q8BK35 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nop53Q8BK35 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nop53Q8BK35 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.52■□□□□ 0.88
Nop53Q8BK35 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nop53Q8BK35 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nop53Q8BK35 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nop53Q8BK35 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.52■□□□□ 0.88
Nop53Q8BK35 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nop53Q8BK35 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.52■□□□□ 0.87
Nop53Q8BK35 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms