Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shroom1Q5SX79 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Shroom1Q5SX79 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shroom1Q5SX79 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shroom1Q5SX79 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shroom1Q5SX79 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shroom1Q5SX79 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.54■□□□□ 0.88
Shroom1Q5SX79 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Shroom1Q5SX79 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shroom1Q5SX79 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom1Q5SX79 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Shroom1Q5SX79 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom1Q5SX79 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom1Q5SX79 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom1Q5SX79 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Shroom1Q5SX79 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom1Q5SX79 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom1Q5SX79 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shroom1Q5SX79 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.53■□□□□ 0.88
Shroom1Q5SX79 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Gm10602-201ENSMUST00000098239 609 ntBASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shroom1Q5SX79 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.52■□□□□ 0.87
Shroom1Q5SX79 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Shroom1Q5SX79 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Shroom1Q5SX79 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Shroom1Q5SX79 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.51■□□□□ 0.87
Shroom1Q5SX79 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.51■□□□□ 0.87
Shroom1Q5SX79 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shroom1Q5SX79 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Shroom1Q5SX79 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.51■□□□□ 0.87
Shroom1Q5SX79 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom1Q5SX79 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom1Q5SX79 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom1Q5SX79 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom1Q5SX79 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Shroom1Q5SX79 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.5■□□□□ 0.87
Shroom1Q5SX79 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom1Q5SX79 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Shroom1Q5SX79 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shroom1Q5SX79 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Shroom1Q5SX79 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom1Q5SX79 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom1Q5SX79 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom1Q5SX79 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.49■□□□□ 0.87
Shroom1Q5SX79 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom1Q5SX79 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom1Q5SX79 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom1Q5SX79 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shroom1Q5SX79 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shroom1Q5SX79 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Gm7514-201ENSMUST00000209475 934 ntBASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shroom1Q5SX79 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shroom1Q5SX79 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms