Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC079834.2-201ENST00000609776 1949 ntBASIC19.34■□□□□ 0.69
CSNK1A1P48729 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK1A1P48729 SLC47A1P1-202ENST00000449666 945 ntBASIC19.34■□□□□ 0.69
CSNK1A1P48729 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.34■□□□□ 0.69
CSNK1A1P48729 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.34■□□□□ 0.69
CSNK1A1P48729 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.34■□□□□ 0.69
CSNK1A1P48729 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK1A1P48729 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK1A1P48729 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.34■□□□□ 0.69
CSNK1A1P48729 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK1A1P48729 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.34■□□□□ 0.69
CSNK1A1P48729 ECEL1P1-201ENST00000373592 1742 ntBASIC19.34■□□□□ 0.69
CSNK1A1P48729 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSNK1A1P48729 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CSNK1A1P48729 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSNK1A1P48729 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.33■□□□□ 0.68
CSNK1A1P48729 PBX2P1-201ENST00000493219 1291 ntBASIC19.33■□□□□ 0.68
CSNK1A1P48729 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.33■□□□□ 0.68
CSNK1A1P48729 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSNK1A1P48729 AC080038.3-201ENST00000623346 1952 ntBASIC19.33■□□□□ 0.68
CSNK1A1P48729 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CSNK1A1P48729 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 AC137767.1-201ENST00000602918 1920 ntBASIC19.32■□□□□ 0.68
CSNK1A1P48729 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CSNK1A1P48729 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.32■□□□□ 0.68
CSNK1A1P48729 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.32■□□□□ 0.68
CSNK1A1P48729 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.32■□□□□ 0.68
CSNK1A1P48729 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CSNK1A1P48729 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CSNK1A1P48729 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSNK1A1P48729 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CSNK1A1P48729 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CSNK1A1P48729 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK1A1P48729 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK1A1P48729 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK1A1P48729 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.31■□□□□ 0.68
CSNK1A1P48729 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.31■□□□□ 0.68
CSNK1A1P48729 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
CSNK1A1P48729 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.31■□□□□ 0.68
CSNK1A1P48729 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.31■□□□□ 0.68
CSNK1A1P48729 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK1A1P48729 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
CSNK1A1P48729 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSNK1A1P48729 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1A1P48729 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CSNK1A1P48729 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1A1P48729 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1A1P48729 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1A1P48729 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1A1P48729 BX842568.3-201ENST00000418104 571 ntBASIC19.3■□□□□ 0.68
CSNK1A1P48729 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1A1P48729 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1A1P48729 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSNK1A1P48729 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSNK1A1P48729 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CSNK1A1P48729 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CSNK1A1P48729 AC010141.3-201ENST00000456659 717 ntBASIC19.29■□□□□ 0.68
CSNK1A1P48729 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.29■□□□□ 0.68
CSNK1A1P48729 AC106739.1-201ENST00000617035 715 ntBASIC19.29■□□□□ 0.68
CSNK1A1P48729 AC110285.6-201ENST00000617652 491 ntBASIC19.29■□□□□ 0.68
CSNK1A1P48729 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSNK1A1P48729 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSNK1A1P48729 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 AC139530.1-201ENST00000575312 1977 ntBASIC19.28■□□□□ 0.68
CSNK1A1P48729 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSNK1A1P48729 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 AP005435.1-201ENST00000529293 1178 ntBASIC19.28■□□□□ 0.68
CSNK1A1P48729 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSNK1A1P48729 LINC00526-201ENST00000581067 1875 ntBASIC19.28■□□□□ 0.68
CSNK1A1P48729 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSNK1A1P48729 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSNK1A1P48729 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.28■□□□□ 0.68
CSNK1A1P48729 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CSNK1A1P48729 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSNK1A1P48729 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1A1P48729 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms