Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BckdkO55028 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
BckdkO55028 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
BckdkO55028 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BckdkO55028 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
BckdkO55028 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BckdkO55028 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.82■□□□□ 0.44
BckdkO55028 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BckdkO55028 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BckdkO55028 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BckdkO55028 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BckdkO55028 Mir6236-201ENSMUST00000184437 123 ntBASIC17.82■□□□□ 0.44
BckdkO55028 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BckdkO55028 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BckdkO55028 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BckdkO55028 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.82■□□□□ 0.44
BckdkO55028 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.82■□□□□ 0.44
BckdkO55028 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BckdkO55028 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
BckdkO55028 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BckdkO55028 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BckdkO55028 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BckdkO55028 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.81■□□□□ 0.44
BckdkO55028 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.81■□□□□ 0.44
BckdkO55028 Smad6-203ENSMUST00000179458 273 ntBASIC17.81■□□□□ 0.44
BckdkO55028 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BckdkO55028 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BckdkO55028 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.81■□□□□ 0.44
BckdkO55028 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.81■□□□□ 0.44
BckdkO55028 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BckdkO55028 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BckdkO55028 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
BckdkO55028 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BckdkO55028 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BckdkO55028 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BckdkO55028 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.8■□□□□ 0.44
BckdkO55028 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BckdkO55028 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BckdkO55028 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BckdkO55028 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BckdkO55028 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BckdkO55028 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.8■□□□□ 0.44
BckdkO55028 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BckdkO55028 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
BckdkO55028 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.79■□□□□ 0.44
BckdkO55028 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
BckdkO55028 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.79■□□□□ 0.44
BckdkO55028 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
BckdkO55028 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.79■□□□□ 0.44
BckdkO55028 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.79■□□□□ 0.44
BckdkO55028 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BckdkO55028 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
BckdkO55028 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BckdkO55028 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
BckdkO55028 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BckdkO55028 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
BckdkO55028 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BckdkO55028 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BckdkO55028 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
BckdkO55028 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.78■□□□□ 0.44
BckdkO55028 Gm40848-201ENSMUST00000221998 324 ntBASIC17.78■□□□□ 0.44
BckdkO55028 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BckdkO55028 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.78■□□□□ 0.44
BckdkO55028 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.78■□□□□ 0.44
BckdkO55028 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.78■□□□□ 0.44
BckdkO55028 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BckdkO55028 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
BckdkO55028 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
BckdkO55028 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BckdkO55028 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BckdkO55028 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BckdkO55028 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BckdkO55028 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.77■□□□□ 0.44
BckdkO55028 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BckdkO55028 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BckdkO55028 Gm10493-201ENSMUST00000097270 612 ntBASIC17.77■□□□□ 0.44
BckdkO55028 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
BckdkO55028 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BckdkO55028 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BckdkO55028 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BckdkO55028 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BckdkO55028 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BckdkO55028 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BckdkO55028 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.76■□□□□ 0.43
BckdkO55028 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BckdkO55028 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BckdkO55028 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.76■□□□□ 0.43
BckdkO55028 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms