Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3383J3QQ59 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3383J3QQ59 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3383J3QQ59 Gm10252-201ENSMUST00000209541 832 ntBASIC20.92■□□□□ 0.94
Gm3383J3QQ59 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Gm3383J3QQ59 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3383J3QQ59 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Gm3383J3QQ59 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3383J3QQ59 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Gm3383J3QQ59 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3383J3QQ59 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Gm3383J3QQ59 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Gm37856-201ENSMUST00000191634 999 ntBASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Gm26524-201ENSMUST00000192339 390 ntBASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3383J3QQ59 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm3383J3QQ59 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm3383J3QQ59 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm3383J3QQ59 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm3383J3QQ59 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Gm3383J3QQ59 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3383J3QQ59 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Gm3383J3QQ59 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3383J3QQ59 Gm7860-201ENSMUST00000121190 879 ntBASIC20.89■□□□□ 0.93
Gm3383J3QQ59 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3383J3QQ59 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.89■□□□□ 0.93
Gm3383J3QQ59 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.89■□□□□ 0.93
Gm3383J3QQ59 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Gm3383J3QQ59 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3383J3QQ59 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3383J3QQ59 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3383J3QQ59 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.87■□□□□ 0.93
Gm3383J3QQ59 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.87■□□□□ 0.93
Gm3383J3QQ59 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3383J3QQ59 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Gm3383J3QQ59 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3383J3QQ59 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Gm3383J3QQ59 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Rab3c-203ENSMUST00000224180 967 ntBASIC20.86■□□□□ 0.93
Gm3383J3QQ59 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3383J3QQ59 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.85■□□□□ 0.93
Gm3383J3QQ59 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3383J3QQ59 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Gm3383J3QQ59 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.85■□□□□ 0.93
Gm3383J3QQ59 Trmt13-210ENSMUST00000198454 880 ntBASIC20.85■□□□□ 0.93
Gm3383J3QQ59 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3383J3QQ59 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Gm10812-201ENSMUST00000099864 546 ntBASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3383J3QQ59 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms