Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Shisa8J3QNX5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa8J3QNX5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa8J3QNX5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa8J3QNX5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa8J3QNX5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.55■□□□□ 0.4
Shisa8J3QNX5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa8J3QNX5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 BC021767-201ENSMUST00000126387 1716 ntBASIC17.54■□□□□ 0.4
Shisa8J3QNX5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shisa8J3QNX5 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Shisa8J3QNX5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa8J3QNX5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.52■□□□□ 0.4
Shisa8J3QNX5 AA386476-201ENSMUST00000098781 1665 ntBASIC17.52■□□□□ 0.4
Shisa8J3QNX5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa8J3QNX5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Shisa8J3QNX5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.52■□□□□ 0.4
Shisa8J3QNX5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shisa8J3QNX5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa8J3QNX5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa8J3QNX5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa8J3QNX5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shisa8J3QNX5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Gm9870-201ENSMUST00000063874 645 ntBASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.51■□□□□ 0.39
Shisa8J3QNX5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shisa8J3QNX5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms