Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
4933424G06RikA0A140LIP3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
4933424G06RikA0A140LIP3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.74■□□□□ 0.75
4933424G06RikA0A140LIP3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
4933424G06RikA0A140LIP3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
4933424G06RikA0A140LIP3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
4933424G06RikA0A140LIP3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
4933424G06RikA0A140LIP3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
4933424G06RikA0A140LIP3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
4933424G06RikA0A140LIP3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
4933424G06RikA0A140LIP3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
4933424G06RikA0A140LIP3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
4933424G06RikA0A140LIP3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
4933424G06RikA0A140LIP3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
4933424G06RikA0A140LIP3 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.73■□□□□ 0.75
4933424G06RikA0A140LIP3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
4933424G06RikA0A140LIP3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
4933424G06RikA0A140LIP3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
4933424G06RikA0A140LIP3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
4933424G06RikA0A140LIP3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.71■□□□□ 0.75
4933424G06RikA0A140LIP3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Gm10602-201ENSMUST00000098239 609 ntBASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
4933424G06RikA0A140LIP3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
4933424G06RikA0A140LIP3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
4933424G06RikA0A140LIP3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
4933424G06RikA0A140LIP3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
4933424G06RikA0A140LIP3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
4933424G06RikA0A140LIP3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
4933424G06RikA0A140LIP3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
4933424G06RikA0A140LIP3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
4933424G06RikA0A140LIP3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
4933424G06RikA0A140LIP3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
4933424G06RikA0A140LIP3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
4933424G06RikA0A140LIP3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
4933424G06RikA0A140LIP3 Gm12933-201ENSMUST00000120203 872 ntBASIC19.67■□□□□ 0.74
4933424G06RikA0A140LIP3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
4933424G06RikA0A140LIP3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
4933424G06RikA0A140LIP3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
4933424G06RikA0A140LIP3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
4933424G06RikA0A140LIP3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
4933424G06RikA0A140LIP3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Gm38205-201ENSMUST00000192243 258 ntBASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
4933424G06RikA0A140LIP3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
4933424G06RikA0A140LIP3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms