Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.76■□□□□ 0.91
VCX3BQ9H321 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
VCX3BQ9H321 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3BQ9H321 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3BQ9H321 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3BQ9H321 AL157384.1-201ENST00000445995 2473 ntBASIC20.76■□□□□ 0.91
VCX3BQ9H321 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCX3BQ9H321 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
VCX3BQ9H321 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VCX3BQ9H321 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.76■□□□□ 0.91
VCX3BQ9H321 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.75■□□□□ 0.91
VCX3BQ9H321 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3BQ9H321 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3BQ9H321 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCX3BQ9H321 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VCX3BQ9H321 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.75■□□□□ 0.91
VCX3BQ9H321 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
VCX3BQ9H321 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.74■□□□□ 0.91
VCX3BQ9H321 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.74■□□□□ 0.91
VCX3BQ9H321 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.74■□□□□ 0.91
VCX3BQ9H321 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.74■□□□□ 0.91
VCX3BQ9H321 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.74■□□□□ 0.91
VCX3BQ9H321 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
VCX3BQ9H321 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCX3BQ9H321 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3BQ9H321 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3BQ9H321 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
VCX3BQ9H321 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3BQ9H321 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3BQ9H321 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3BQ9H321 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3BQ9H321 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3BQ9H321 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.73■□□□□ 0.91
VCX3BQ9H321 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
VCX3BQ9H321 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VCX3BQ9H321 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCX3BQ9H321 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3BQ9H321 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3BQ9H321 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3BQ9H321 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
VCX3BQ9H321 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VCX3BQ9H321 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3BQ9H321 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.72■□□□□ 0.91
VCX3BQ9H321 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.72■□□□□ 0.91
VCX3BQ9H321 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3BQ9H321 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3BQ9H321 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VCX3BQ9H321 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.72■□□□□ 0.91
VCX3BQ9H321 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCX3BQ9H321 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3BQ9H321 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3BQ9H321 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3BQ9H321 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VCX3BQ9H321 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VCX3BQ9H321 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VCX3BQ9H321 SMPD5-203ENST00000639008 1464 ntBASIC20.71■□□□□ 0.91
VCX3BQ9H321 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3BQ9H321 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3BQ9H321 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3BQ9H321 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3BQ9H321 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3BQ9H321 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VCX3BQ9H321 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.71■□□□□ 0.91
VCX3BQ9H321 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCX3BQ9H321 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.7■□□□□ 0.91
VCX3BQ9H321 AL353803.4-201ENST00000565882 1934 ntBASIC20.7■□□□□ 0.91
VCX3BQ9H321 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3BQ9H321 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.7■□□□□ 0.9
VCX3BQ9H321 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3BQ9H321 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3BQ9H321 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3BQ9H321 AL157400.5-201ENST00000507624 621 ntBASIC20.7■□□□□ 0.9
VCX3BQ9H321 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
VCX3BQ9H321 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3BQ9H321 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VCX3BQ9H321 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3BQ9H321 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VCX3BQ9H321 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3BQ9H321 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3BQ9H321 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VCX3BQ9H321 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VCX3BQ9H321 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCX3BQ9H321 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VCX3BQ9H321 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.69■□□□□ 0.9
VCX3BQ9H321 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.69■□□□□ 0.9
VCX3BQ9H321 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VCX3BQ9H321 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCX3BQ9H321 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms