Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx41Q91VN6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx41Q91VN6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx41Q91VN6 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.15■■□□□ 1.14
Ddx41Q91VN6 Gm42569-201ENSMUST00000200539 472 ntBASIC22.15■■□□□ 1.14
Ddx41Q91VN6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx41Q91VN6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx41Q91VN6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx41Q91VN6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Ddx41Q91VN6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Ddx41Q91VN6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.14■■□□□ 1.14
Ddx41Q91VN6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ddx41Q91VN6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ddx41Q91VN6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ddx41Q91VN6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.14■■□□□ 1.13
Ddx41Q91VN6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx41Q91VN6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Ddx41Q91VN6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Gm27405-201ENSMUST00000184201 112 ntBASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Ddx41Q91VN6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.12■■□□□ 1.13
Ddx41Q91VN6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx41Q91VN6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.12■■□□□ 1.13
Ddx41Q91VN6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx41Q91VN6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx41Q91VN6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx41Q91VN6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx41Q91VN6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx41Q91VN6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Gm29257-201ENSMUST00000186115 639 ntBASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx41Q91VN6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx41Q91VN6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.13
Ddx41Q91VN6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ddx41Q91VN6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx41Q91VN6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx41Q91VN6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx41Q91VN6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Ddx41Q91VN6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.08■■□□□ 1.13
Ddx41Q91VN6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx41Q91VN6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx41Q91VN6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx41Q91VN6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx41Q91VN6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx41Q91VN6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx41Q91VN6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx41Q91VN6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx41Q91VN6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx41Q91VN6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx41Q91VN6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.07■■□□□ 1.12
Ddx41Q91VN6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx41Q91VN6 Gm10033-202ENSMUST00000211874 928 ntBASIC22.07■■□□□ 1.12
Ddx41Q91VN6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx41Q91VN6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
Ddx41Q91VN6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx41Q91VN6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ddx41Q91VN6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.06■■□□□ 1.12
Ddx41Q91VN6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 128.2 ms