Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC44A1Q8WWI5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC44A1Q8WWI5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC44A1Q8WWI5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SLC44A1Q8WWI5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SLC44A1Q8WWI5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC44A1Q8WWI5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.89■■□□□ 1.09
SLC44A1Q8WWI5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC44A1Q8WWI5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.89■■□□□ 1.09
SLC44A1Q8WWI5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC44A1Q8WWI5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC44A1Q8WWI5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 AC244015.2-201ENST00000616358 1861 ntBASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 AC092028.1-203ENST00000608262 953 ntBASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC44A1Q8WWI5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC44A1Q8WWI5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC44A1Q8WWI5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC44A1Q8WWI5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SLC44A1Q8WWI5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.86■■□□□ 1.09
SLC44A1Q8WWI5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SLC44A1Q8WWI5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.86■■□□□ 1.09
SLC44A1Q8WWI5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
SLC44A1Q8WWI5 C17orf82-201ENST00000623772 1530 ntBASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC44A1Q8WWI5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC44A1Q8WWI5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC44A1Q8WWI5 AC005229.4-201ENST00000610085 2198 ntBASIC21.83■■□□□ 1.09
SLC44A1Q8WWI5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC44A1Q8WWI5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC44A1Q8WWI5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC44A1Q8WWI5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC44A1Q8WWI5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SLC44A1Q8WWI5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms