Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim60Q8VI40 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim60Q8VI40 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Trim60Q8VI40 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim60Q8VI40 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trim60Q8VI40 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim60Q8VI40 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim60Q8VI40 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim60Q8VI40 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.99■□□□□ 0.79
Trim60Q8VI40 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.99■□□□□ 0.79
Trim60Q8VI40 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim60Q8VI40 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim60Q8VI40 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim60Q8VI40 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim60Q8VI40 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim60Q8VI40 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim60Q8VI40 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim60Q8VI40 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.98■□□□□ 0.79
Trim60Q8VI40 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim60Q8VI40 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim60Q8VI40 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim60Q8VI40 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim60Q8VI40 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim60Q8VI40 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim60Q8VI40 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim60Q8VI40 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim60Q8VI40 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim60Q8VI40 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim60Q8VI40 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim60Q8VI40 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Trim60Q8VI40 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.97■□□□□ 0.79
Trim60Q8VI40 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim60Q8VI40 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim60Q8VI40 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.95■□□□□ 0.78
Trim60Q8VI40 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim60Q8VI40 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim60Q8VI40 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim60Q8VI40 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim60Q8VI40 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.95■□□□□ 0.78
Trim60Q8VI40 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim60Q8VI40 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim60Q8VI40 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim60Q8VI40 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Trim60Q8VI40 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim60Q8VI40 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.94■□□□□ 0.78
Trim60Q8VI40 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim60Q8VI40 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trim60Q8VI40 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Gm45102-201ENSMUST00000207427 857 ntBASIC19.93■□□□□ 0.78
Trim60Q8VI40 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.93■□□□□ 0.78
Trim60Q8VI40 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim60Q8VI40 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim60Q8VI40 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim60Q8VI40 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim60Q8VI40 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.92■□□□□ 0.78
Trim60Q8VI40 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim60Q8VI40 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim60Q8VI40 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim60Q8VI40 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim60Q8VI40 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim60Q8VI40 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim60Q8VI40 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Trim60Q8VI40 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms