Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpap2Q8VC34 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rpap2Q8VC34 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpap2Q8VC34 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Rpap2Q8VC34 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpap2Q8VC34 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Rpap2Q8VC34 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpap2Q8VC34 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpap2Q8VC34 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rpap2Q8VC34 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpap2Q8VC34 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Rpap2Q8VC34 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.29■■□□□ 1
Rpap2Q8VC34 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.29■■□□□ 1
Rpap2Q8VC34 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rpap2Q8VC34 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rpap2Q8VC34 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rpap2Q8VC34 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rpap2Q8VC34 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.29■■□□□ 1
Rpap2Q8VC34 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.29■■□□□ 1
Rpap2Q8VC34 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rpap2Q8VC34 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rpap2Q8VC34 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Rpap2Q8VC34 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rpap2Q8VC34 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.28■■□□□ 1
Rpap2Q8VC34 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rpap2Q8VC34 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rpap2Q8VC34 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rpap2Q8VC34 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rpap2Q8VC34 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rpap2Q8VC34 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rpap2Q8VC34 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rpap2Q8VC34 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rpap2Q8VC34 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rpap2Q8VC34 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.27■■□□□ 1
Rpap2Q8VC34 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.27■■□□□ 1
Rpap2Q8VC34 Gm40848-201ENSMUST00000221998 324 ntBASIC21.27■■□□□ 1
Rpap2Q8VC34 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.27■■□□□ 1
Rpap2Q8VC34 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rpap2Q8VC34 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rpap2Q8VC34 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Rpap2Q8VC34 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rpap2Q8VC34 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpap2Q8VC34 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Gm27801-201ENSMUST00000184174 223 ntBASIC21.25■□□□□ 0.99
Rpap2Q8VC34 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.25■□□□□ 0.99
Rpap2Q8VC34 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.24■□□□□ 0.99
Rpap2Q8VC34 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rpap2Q8VC34 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpap2Q8VC34 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpap2Q8VC34 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.24■□□□□ 0.99
Rpap2Q8VC34 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.24■□□□□ 0.99
Rpap2Q8VC34 Gm43060-201ENSMUST00000200621 289 ntBASIC21.24■□□□□ 0.99
Rpap2Q8VC34 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpap2Q8VC34 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rpap2Q8VC34 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpap2Q8VC34 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpap2Q8VC34 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpap2Q8VC34 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Rpap2Q8VC34 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpap2Q8VC34 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.23■□□□□ 0.99
Rpap2Q8VC34 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpap2Q8VC34 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpap2Q8VC34 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rpap2Q8VC34 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms