Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT78Q8N1N4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 AL031602.1-201ENST00000633169 911 ntBASIC21.03■□□□□ 0.96
KRT78Q8N1N4 AC242852.2-201ENST00000615738 1807 ntBASIC21.03■□□□□ 0.96
KRT78Q8N1N4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT78Q8N1N4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 CA15P2-201ENST00000611168 834 ntBASIC21.02■□□□□ 0.96
KRT78Q8N1N4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KRT78Q8N1N4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
KRT78Q8N1N4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT78Q8N1N4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT78Q8N1N4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT78Q8N1N4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT78Q8N1N4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT78Q8N1N4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT78Q8N1N4 AL136162.1-201ENST00000607711 1078 ntBASIC21.01■□□□□ 0.95
KRT78Q8N1N4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT78Q8N1N4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT78Q8N1N4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT78Q8N1N4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
KRT78Q8N1N4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21■□□□□ 0.95
KRT78Q8N1N4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21■□□□□ 0.95
KRT78Q8N1N4 AC087239.1-201ENST00000622671 572 ntBASIC21■□□□□ 0.95
KRT78Q8N1N4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
KRT78Q8N1N4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21■□□□□ 0.95
KRT78Q8N1N4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KRT78Q8N1N4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT78Q8N1N4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.99■□□□□ 0.95
KRT78Q8N1N4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 AC135279.3-201ENST00000610945 1311 ntBASIC20.99■□□□□ 0.95
KRT78Q8N1N4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT78Q8N1N4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 AC096631.2-201ENST00000436136 790 ntBASIC20.98■□□□□ 0.95
KRT78Q8N1N4 AC024257.2-201ENST00000549699 147 ntBASIC20.98■□□□□ 0.95
KRT78Q8N1N4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT78Q8N1N4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
KRT78Q8N1N4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms