Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 Gm11175-201ENSMUST00000116172 543 ntBASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf4Q8K4J2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ebf4Q8K4J2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf4Q8K4J2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ebf4Q8K4J2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf4Q8K4J2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf4Q8K4J2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.65■□□□□ 0.42
Ebf4Q8K4J2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ebf4Q8K4J2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ebf4Q8K4J2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf4Q8K4J2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf4Q8K4J2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf4Q8K4J2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Ebf4Q8K4J2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ebf4Q8K4J2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf4Q8K4J2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Ebf4Q8K4J2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf4Q8K4J2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ebf4Q8K4J2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf4Q8K4J2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf4Q8K4J2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf4Q8K4J2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf4Q8K4J2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf4Q8K4J2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ebf4Q8K4J2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ebf4Q8K4J2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ebf4Q8K4J2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf4Q8K4J2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf4Q8K4J2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ebf4Q8K4J2 Gm7332-201ENSMUST00000118351 454 ntBASIC17.61■□□□□ 0.41
Ebf4Q8K4J2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.61■□□□□ 0.41
Ebf4Q8K4J2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf4Q8K4J2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ebf4Q8K4J2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Ebf4Q8K4J2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf4Q8K4J2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf4Q8K4J2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf4Q8K4J2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms