Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Shroom1Q5SX79 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.64■□□□□ 0.89
Shroom1Q5SX79 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shroom1Q5SX79 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Shroom1Q5SX79 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Shroom1Q5SX79 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shroom1Q5SX79 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shroom1Q5SX79 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shroom1Q5SX79 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shroom1Q5SX79 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Shroom1Q5SX79 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shroom1Q5SX79 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shroom1Q5SX79 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shroom1Q5SX79 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shroom1Q5SX79 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Gm12933-201ENSMUST00000120203 872 ntBASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shroom1Q5SX79 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shroom1Q5SX79 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Reep4-203ENSMUST00000226563 1444 ntBASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shroom1Q5SX79 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shroom1Q5SX79 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Shroom1Q5SX79 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Shroom1Q5SX79 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shroom1Q5SX79 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shroom1Q5SX79 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shroom1Q5SX79 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Shroom1Q5SX79 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.58■□□□□ 0.89
Shroom1Q5SX79 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shroom1Q5SX79 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shroom1Q5SX79 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shroom1Q5SX79 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shroom1Q5SX79 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Shroom1Q5SX79 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shroom1Q5SX79 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shroom1Q5SX79 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Shroom1Q5SX79 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Shroom1Q5SX79 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.56■□□□□ 0.88
Shroom1Q5SX79 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shroom1Q5SX79 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shroom1Q5SX79 Iqck-206ENSMUST00000208658 2891 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms