Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43aQ3TL54 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43aQ3TL54 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trim43aQ3TL54 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43aQ3TL54 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43aQ3TL54 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43aQ3TL54 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43aQ3TL54 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43aQ3TL54 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.47■□□□□ 0.87
Trim43aQ3TL54 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43aQ3TL54 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43aQ3TL54 BC021767-201ENSMUST00000126387 1716 ntBASIC20.47■□□□□ 0.87
Trim43aQ3TL54 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim43aQ3TL54 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim43aQ3TL54 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trim43aQ3TL54 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim43aQ3TL54 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim43aQ3TL54 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trim43aQ3TL54 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Trim43aQ3TL54 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43aQ3TL54 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43aQ3TL54 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43aQ3TL54 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim43aQ3TL54 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43aQ3TL54 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43aQ3TL54 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.42■□□□□ 0.86
Trim43aQ3TL54 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43aQ3TL54 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43aQ3TL54 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim43aQ3TL54 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms