Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn6Q03958 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pfdn6Q03958 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pfdn6Q03958 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Pfdn6Q03958 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pfdn6Q03958 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.39■□□□□ 0.69
Pfdn6Q03958 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn6Q03958 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn6Q03958 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn6Q03958 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn6Q03958 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn6Q03958 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.38■□□□□ 0.69
Pfdn6Q03958 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pfdn6Q03958 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn6Q03958 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn6Q03958 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn6Q03958 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn6Q03958 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn6Q03958 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.37■□□□□ 0.69
Pfdn6Q03958 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.37■□□□□ 0.69
Pfdn6Q03958 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.37■□□□□ 0.69
Pfdn6Q03958 Gm43137-201ENSMUST00000198052 594 ntBASIC19.37■□□□□ 0.69
Pfdn6Q03958 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn6Q03958 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn6Q03958 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn6Q03958 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn6Q03958 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Pfdn6Q03958 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn6Q03958 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn6Q03958 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pfdn6Q03958 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn6Q03958 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn6Q03958 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn6Q03958 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn6Q03958 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pfdn6Q03958 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn6Q03958 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pfdn6Q03958 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn6Q03958 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.34■□□□□ 0.69
Pfdn6Q03958 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pfdn6Q03958 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pfdn6Q03958 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pfdn6Q03958 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.33■□□□□ 0.69
Pfdn6Q03958 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.33■□□□□ 0.69
Pfdn6Q03958 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pfdn6Q03958 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms