Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 GCN5YGR252W 1320 nt5.7□□□□□ -1.5
MSH4P40965 MBP1YDL056W 2502 nt5.7□□□□□ -1.5
MSH4P40965 FCF1YDR339C 570 nt5.69□□□□□ -1.5
MSH4P40965 CNL1YDR357C 369 nt5.69□□□□□ -1.5
MSH4P40965 YIL082WYIL082W 873 nt5.69□□□□□ -1.5
MSH4P40965 SYS1YJL004C 612 nt5.69□□□□□ -1.5
MSH4P40965 CPR3YML078W 549 nt5.69□□□□□ -1.5
MSH4P40965 YOL013W-BYOL013W-B 291 nt5.69□□□□□ -1.5
MSH4P40965 RPS9BYBR189W 588 nt5.69□□□□□ -1.5
MSH4P40965 ZUO1YGR285C 1302 nt5.69□□□□□ -1.5
MSH4P40965 RFT1YBL020W 1725 nt5.68□□□□□ -1.5
MSH4P40965 MHF2YDL160C-A 243 nt5.68□□□□□ -1.5
MSH4P40965 YEL010WYEL010W 351 nt5.68□□□□□ -1.5
MSH4P40965 YGL117WYGL117W 798 nt5.68□□□□□ -1.5
MSH4P40965 BUD19YJL188C 309 nt5.68□□□□□ -1.5
MSH4P40965 ERD2YBL040C 660 nt5.68□□□□□ -1.5
MSH4P40965 ATP19YOL077W-A 207 nt5.68□□□□□ -1.5
MSH4P40965 CUE5YOR042W 1236 nt5.68□□□□□ -1.5
MSH4P40965 PXA1YPL147W 2613 nt5.68□□□□□ -1.5
MSH4P40965 MIG1YGL035C 1515 nt5.68□□□□□ -1.5
MSH4P40965 MDM38YOL027C 1722 nt5.68□□□□□ -1.5
MSH4P40965 FUI1YBL042C 1920 nt5.68□□□□□ -1.5
MSH4P40965 YMR111CYMR111C 1389 nt5.67□□□□□ -1.5
MSH4P40965 PUS1YPL212C 1635 nt5.67□□□□□ -1.5
MSH4P40965 SPO1YNL012W 1896 nt5.67□□□□□ -1.5
MSH4P40965 HPC2YBR215W 1878 nt5.67□□□□□ -1.5
MSH4P40965 SLU7YDR088C 1149 nt5.67□□□□□ -1.5
MSH4P40965 CTH1YDR151C 978 nt5.67□□□□□ -1.5
MSH4P40965 YER133W-AYER133W-A 342 nt5.67□□□□□ -1.5
MSH4P40965 YGR149WYGR149W 1299 nt5.67□□□□□ -1.5
MSH4P40965 YHL046W-AYHL046W-A 327 nt5.67□□□□□ -1.5
MSH4P40965 LIN1YHR156C 1023 nt5.67□□□□□ -1.5
MSH4P40965 YLR264C-AYLR264C-A 117 nt5.67□□□□□ -1.5
MSH4P40965 MRPL39YML009C 213 nt5.67□□□□□ -1.5
MSH4P40965 YBL096CYBL096C 309 nt5.67□□□□□ -1.5
MSH4P40965 SGT1YOR057W 1188 nt5.67□□□□□ -1.5
MSH4P40965 CDC21YOR074C 915 nt5.67□□□□□ -1.5
MSH4P40965 TUM1YOR251C 915 nt5.67□□□□□ -1.5
MSH4P40965 GRE1YPL223C 507 nt5.67□□□□□ -1.5
MSH4P40965 YPR170W-AYPR170W-A 186 nt5.67□□□□□ -1.5
MSH4P40965 NGL3YML118W 1518 nt5.67□□□□□ -1.5
MSH4P40965 SED4YCR067C 3198 nt5.67□□□□□ -1.5
MSH4P40965 RAD16YBR114W 2373 nt5.66□□□□□ -1.5
MSH4P40965 PRM1YNL279W 1986 nt5.66□□□□□ -1.5
MSH4P40965 MMT1YMR177W 1533 nt5.66□□□□□ -1.5
MSH4P40965 YDR118W-AYDR118W-A 117 nt5.66□□□□□ -1.5
MSH4P40965 MEI4YER044C-A 1227 nt5.66□□□□□ -1.5
MSH4P40965 YER067C-AYER067C-A 324 nt5.66□□□□□ -1.5
MSH4P40965 SPT15YER148W 723 nt5.66□□□□□ -1.5
MSH4P40965 YGL193CYGL193C 312 nt5.66□□□□□ -1.5
MSH4P40965 TAN1YGL232W 870 nt5.66□□□□□ -1.5
MSH4P40965 YJR012CYJR012C 624 nt5.66□□□□□ -1.5
MSH4P40965 YAL026C-AYAL026C-A 438 nt5.66□□□□□ -1.5
MSH4P40965 JLP1YLL057C 1239 nt5.66□□□□□ -1.5
MSH4P40965 SEN15YMR059W 387 nt5.66□□□□□ -1.5
MSH4P40965 YFL040WYFL040W 1623 nt5.66□□□□□ -1.5
MSH4P40965 YDL012CYDL012C 324 nt5.65□□□□□ -1.5
MSH4P40965 RDI1YDL135C 609 nt5.65□□□□□ -1.5
MSH4P40965 SCS2YER120W 735 nt5.65□□□□□ -1.5
MSH4P40965 YGR042WYGR042W 816 nt5.65□□□□□ -1.5
MSH4P40965 GLG2YJL137C 1143 nt5.65□□□□□ -1.5
MSH4P40965 YMR315WYMR315W 1050 nt5.65□□□□□ -1.5
MSH4P40965 MRM1YOR201C 1239 nt5.65□□□□□ -1.5
MSH4P40965 UTP5YDR398W 1932 nt5.65□□□□□ -1.51
MSH4P40965 ERG9YHR190W 1335 nt5.65□□□□□ -1.51
MSH4P40965 STE7YDL159W 1548 nt5.64□□□□□ -1.51
MSH4P40965 MSC7YHR039C 1935 nt5.64□□□□□ -1.51
MSH4P40965 ALG11YNL048W 1647 nt5.64□□□□□ -1.51
MSH4P40965 TDA10YGR205W 873 nt5.64□□□□□ -1.51
MSH4P40965 PRS3YHL011C 963 nt5.64□□□□□ -1.51
MSH4P40965 YKL177WYKL177W 339 nt5.64□□□□□ -1.51
MSH4P40965 TRI1YMR233W 681 nt5.64□□□□□ -1.51
MSH4P40965 TOM7YNL070W 183 nt5.64□□□□□ -1.51
MSH4P40965 VPS21YOR089C 633 nt5.64□□□□□ -1.51
MSH4P40965 EMP46YLR080W 1335 nt5.64□□□□□ -1.51
MSH4P40965 PRO2YOR323C 1371 nt5.64□□□□□ -1.51
MSH4P40965 TSL1YML100W 3297 nt5.64□□□□□ -1.51
MSH4P40965 ATM1YMR301C 2073 nt5.63□□□□□ -1.51
MSH4P40965 POL12YBL035C 2118 nt5.63□□□□□ -1.51
MSH4P40965 YDR203WYDR203W 318 nt5.63□□□□□ -1.51
MSH4P40965 LRS4YDR439W 1044 nt5.63□□□□□ -1.51
MSH4P40965 MNN11YJL183W 1269 nt5.63□□□□□ -1.51
MSH4P40965 STE18YJR086W 333 nt5.63□□□□□ -1.51
MSH4P40965 YHC1YLR298C 696 nt5.63□□□□□ -1.51
MSH4P40965 YLR406C-AYLR406C-A 150 nt5.63□□□□□ -1.51
MSH4P40965 YNL277W-AYNL277W-A 189 nt5.63□□□□□ -1.51
MSH4P40965 PET123YOR158W 957 nt5.63□□□□□ -1.51
MSH4P40965 TMA16YOR252W 537 nt5.63□□□□□ -1.51
MSH4P40965 YPR172WYPR172W 603 nt5.63□□□□□ -1.51
MSH4P40965 YLR446WYLR446W 1302 nt5.63□□□□□ -1.51
MSH4P40965 RKM2YDR198C 1440 nt5.63□□□□□ -1.51
MSH4P40965 ATH1YPR026W 3636 nt5.63□□□□□ -1.51
MSH4P40965 GPB1YOR371C 2694 nt5.62□□□□□ -1.51
MSH4P40965 VHC1YBR235W 3363 nt5.62□□□□□ -1.51
MSH4P40965 NOP16YER002W 696 nt5.62□□□□□ -1.51
MSH4P40965 UPF3YGR072W 1164 nt5.62□□□□□ -1.51
MSH4P40965 YAL069WYAL069W 315 nt5.62□□□□□ -1.51
MSH4P40965 RLP24YLR009W 600 nt5.62□□□□□ -1.51
MSH4P40965 MAP1YLR244C 1164 nt5.62□□□□□ -1.51
MSH4P40965 TRM10YOL093W 882 nt5.62□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 46.5 ms