Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YGR219WYGR219W 342 nt5.01□□□□□ -1.61
SSM4P40318 SHE3YBR130C 1278 nt5.01□□□□□ -1.61
SSM4P40318 ALG11YNL048W 1647 nt5.01□□□□□ -1.61
SSM4P40318 AGA1YNR044W 2178 nt5.01□□□□□ -1.61
SSM4P40318 AVT1YJR001W 1809 nt5.01□□□□□ -1.61
SSM4P40318 RAD1YPL022W 3303 nt5.01□□□□□ -1.61
SSM4P40318 TIF4632YGL049C 2745 nt5.01□□□□□ -1.61
SSM4P40318 OSH3YHR073W 2991 nt5.01□□□□□ -1.61
SSM4P40318 CYC1YJR048W 330 nt5□□□□□ -1.61
SSM4P40318 TFA2YKR062W 987 nt5□□□□□ -1.61
SSM4P40318 SPO20YMR017W 1194 nt5□□□□□ -1.61
SSM4P40318 GAS4YOL132W 1416 nt5□□□□□ -1.61
SSM4P40318 TCB3YML072C 4638 nt5□□□□□ -1.61
SSM4P40318 SLM5YCR024C 1479 nt5□□□□□ -1.61
SSM4P40318 SKM1YOL113W 1968 nt4.99□□□□□ -1.61
SSM4P40318 BMH1YER177W 804 nt4.99□□□□□ -1.61
SSM4P40318 YGL074CYGL074C 327 nt4.99□□□□□ -1.61
SSM4P40318 SDT1YGL224C 843 nt4.99□□□□□ -1.61
SSM4P40318 LSM12YHR121W 564 nt4.99□□□□□ -1.61
SSM4P40318 YJR085CYJR085C 318 nt4.99□□□□□ -1.61
SSM4P40318 CLB5YPR120C 1308 nt4.99□□□□□ -1.61
SSM4P40318 PMT4YJR143C 2289 nt4.99□□□□□ -1.61
SSM4P40318 ENT1YDL161W 1365 nt4.99□□□□□ -1.61
SSM4P40318 GPB1YOR371C 2694 nt4.99□□□□□ -1.61
SSM4P40318 CPR3YML078W 549 nt4.98□□□□□ -1.61
SSM4P40318 RAD10YML095C 633 nt4.98□□□□□ -1.61
SSM4P40318 ERD2YBL040C 660 nt4.98□□□□□ -1.61
SSM4P40318 RAD14YMR201C 1116 nt4.98□□□□□ -1.61
SSM4P40318 IMP4YNL075W 873 nt4.98□□□□□ -1.61
SSM4P40318 IRC14YOR135C 342 nt4.98□□□□□ -1.61
SSM4P40318 SET6YPL165C 1122 nt4.98□□□□□ -1.61
SSM4P40318 GRE1YPL223C 507 nt4.98□□□□□ -1.61
SSM4P40318 RSC1YGR056W 2787 nt4.98□□□□□ -1.61
SSM4P40318 LCB5YLR260W 2064 nt4.98□□□□□ -1.61
SSM4P40318 GLC3YEL011W 2115 nt4.98□□□□□ -1.61
SSM4P40318 SEC9YGR009C 1956 nt4.98□□□□□ -1.61
SSM4P40318 YCR050CYCR050C 309 nt4.97□□□□□ -1.61
SSM4P40318 YDR161WYDR161W 1164 nt4.97□□□□□ -1.61
SSM4P40318 YDR222WYDR222W 1248 nt4.97□□□□□ -1.61
SSM4P40318 POP6YGR030C 477 nt4.97□□□□□ -1.61
SSM4P40318 AIR1YIL079C 1083 nt4.97□□□□□ -1.61
SSM4P40318 AUR1YKL004W 1206 nt4.97□□□□□ -1.61
SSM4P40318 PIR3YKL163W 978 nt4.97□□□□□ -1.61
SSM4P40318 IRC25YLR021W 540 nt4.97□□□□□ -1.61
SSM4P40318 ATG8YBL078C 354 nt4.97□□□□□ -1.61
SSM4P40318 TOS3YGL179C 1683 nt4.97□□□□□ -1.61
SSM4P40318 GCN5YGR252W 1320 nt4.97□□□□□ -1.61
SSM4P40318 SSA2YLL024C 1920 nt4.97□□□□□ -1.61
SSM4P40318 TYW1YPL207W 2433 nt4.97□□□□□ -1.61
SSM4P40318 TFA1YKL028W 1449 nt4.97□□□□□ -1.61
SSM4P40318 YMR1YJR110W 2067 nt4.97□□□□□ -1.61
SSM4P40318 MRPL11YDL202W 750 nt4.97□□□□□ -1.61
SSM4P40318 RPS8BYER102W 603 nt4.97□□□□□ -1.61
SSM4P40318 RPS8AYBL072C 603 nt4.97□□□□□ -1.61
SSM4P40318 MCK1YNL307C 1128 nt4.97□□□□□ -1.61
SSM4P40318 AIM39YOL053W 1188 nt4.97□□□□□ -1.61
SSM4P40318 VPS21YOR089C 633 nt4.97□□□□□ -1.61
SSM4P40318 HUL4YJR036C 2679 nt4.96□□□□□ -1.62
SSM4P40318 IPI3YNL182C 1668 nt4.96□□□□□ -1.62
SSM4P40318 MSS2YDL107W 1056 nt4.96□□□□□ -1.62
SSM4P40318 ADH4YGL256W 1149 nt4.96□□□□□ -1.62
SSM4P40318 CDC73YLR418C 1182 nt4.96□□□□□ -1.62
SSM4P40318 OPY2YPR075C 1083 nt4.96□□□□□ -1.62
SSM4P40318 IOC4YMR044W 1428 nt4.95□□□□□ -1.62
SSM4P40318 MDM38YOL027C 1722 nt4.95□□□□□ -1.62
SSM4P40318 PEX19YDL065C 1029 nt4.95□□□□□ -1.62
SSM4P40318 KIN28YDL108W 921 nt4.95□□□□□ -1.62
SSM4P40318 YDR090CYDR090C 933 nt4.95□□□□□ -1.62
SSM4P40318 YHR069C-AYHR069C-A 363 nt4.95□□□□□ -1.62
SSM4P40318 YOR034C-AYOR034C-A 243 nt4.95□□□□□ -1.62
SSM4P40318 RRN11YML043C 1524 nt4.94□□□□□ -1.62
SSM4P40318 CLN2YPL256C 1638 nt4.94□□□□□ -1.62
SSM4P40318 YDR274CYDR274C 372 nt4.94□□□□□ -1.62
SSM4P40318 ECM4YKR076W 1113 nt4.94□□□□□ -1.62
SSM4P40318 NSE1YLR007W 1011 nt4.94□□□□□ -1.62
SSM4P40318 ILV5YLR355C 1188 nt4.94□□□□□ -1.62
SSM4P40318 YOR022CYOR022C 2148 nt4.94□□□□□ -1.62
SSM4P40318 RTK1YDL025C 1863 nt4.93□□□□□ -1.62
SSM4P40318 PEX21YGR239C 867 nt4.93□□□□□ -1.62
SSM4P40318 MRPL37YBR268W 318 nt4.93□□□□□ -1.62
SSM4P40318 MNL1YHR204W 2391 nt4.92□□□□□ -1.62
SSM4P40318 YDR193WYDR193W 399 nt4.92□□□□□ -1.62
SSM4P40318 YDR336WYDR336W 945 nt4.92□□□□□ -1.62
SSM4P40318 YGL063C-AYGL063C-A 150 nt4.92□□□□□ -1.62
SSM4P40318 CAX4YGR036C 720 nt4.92□□□□□ -1.62
SSM4P40318 YKL177WYKL177W 339 nt4.92□□□□□ -1.62
SSM4P40318 YMR178WYMR178W 825 nt4.92□□□□□ -1.62
SSM4P40318 YBR137WYBR137W 540 nt4.92□□□□□ -1.62
SSM4P40318 CNS1YBR155W 1158 nt4.92□□□□□ -1.62
SSM4P40318 STB2YMR053C 2553 nt4.92□□□□□ -1.62
SSM4P40318 SRO9YCL037C 1305 nt4.92□□□□□ -1.62
SSM4P40318 PUB1YNL016W 1362 nt4.92□□□□□ -1.62
SSM4P40318 FMP30YPL103C 1407 nt4.92□□□□□ -1.62
SSM4P40318 ALA1YOR335C 2877 nt4.92□□□□□ -1.62
SSM4P40318 TAF7YMR227C 1773 nt4.91□□□□□ -1.62
SSM4P40318 IKS1YJL057C 2004 nt4.91□□□□□ -1.62
SSM4P40318 RPO31YOR116C 4383 nt4.91□□□□□ -1.62
SSM4P40318 YGR266WYGR266W 2106 nt4.91□□□□□ -1.62
SSM4P40318 AGE2YIL044C 897 nt4.91□□□□□ -1.62
SSM4P40318 RPC17YJL011C 486 nt4.91□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 50 ms