Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf1aP25118 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf1aP25118 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfrsf1aP25118 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
Tnfrsf1aP25118 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.21■□□□□ 0.18
Tnfrsf1aP25118 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf1aP25118 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf1aP25118 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 AA386476-201ENSMUST00000098781 1665 ntBASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf1aP25118 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf1aP25118 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Gm15039-201ENSMUST00000118914 875 ntBASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Gm9847-201ENSMUST00000052528 599 ntBASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf1aP25118 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1aP25118 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1aP25118 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1aP25118 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.15■□□□□ 0.18
Tnfrsf1aP25118 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1aP25118 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf1aP25118 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Tnfrsf1aP25118 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms