Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Hps1O08983 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hps1O08983 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.85■□□□□ 0.45
Hps1O08983 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hps1O08983 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hps1O08983 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.84■□□□□ 0.45
Hps1O08983 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hps1O08983 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hps1O08983 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hps1O08983 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.84■□□□□ 0.45
Hps1O08983 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.84■□□□□ 0.45
Hps1O08983 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hps1O08983 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hps1O08983 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hps1O08983 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Hps1O08983 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hps1O08983 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Hps1O08983 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.83■□□□□ 0.45
Hps1O08983 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hps1O08983 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hps1O08983 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hps1O08983 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.83■□□□□ 0.44
Hps1O08983 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Hps1O08983 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Hps1O08983 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hps1O08983 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
Hps1O08983 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hps1O08983 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.83■□□□□ 0.44
Hps1O08983 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Hps1O08983 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hps1O08983 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hps1O08983 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hps1O08983 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hps1O08983 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Hps1O08983 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.82■□□□□ 0.44
Hps1O08983 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.82■□□□□ 0.44
Hps1O08983 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hps1O08983 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hps1O08983 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hps1O08983 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hps1O08983 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hps1O08983 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hps1O08983 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hps1O08983 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hps1O08983 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hps1O08983 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hps1O08983 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Hps1O08983 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hps1O08983 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hps1O08983 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.81■□□□□ 0.44
Hps1O08983 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hps1O08983 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hps1O08983 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hps1O08983 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hps1O08983 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Hps1O08983 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hps1O08983 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.79■□□□□ 0.44
Hps1O08983 Gm18284-201ENSMUST00000172604 624 ntBASIC17.79■□□□□ 0.44
Hps1O08983 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.79■□□□□ 0.44
Hps1O08983 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.79■□□□□ 0.44
Hps1O08983 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.79■□□□□ 0.44
Hps1O08983 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hps1O08983 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.78■□□□□ 0.44
Hps1O08983 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms