Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB5Q9Y5E4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.14■■□□□ 1.29
PCDHB5Q9Y5E4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB5Q9Y5E4 LINC02228-203ENST00000641970 1355 ntBASIC23.14■■□□□ 1.29
PCDHB5Q9Y5E4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 DUX4L2-201ENST00000561772 1275 ntBASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 CCDC92B-201ENST00000575506 885 ntBASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 DUX4L6-201ENST00000626483 1275 ntBASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 DUX4L1-201ENST00000627662 1275 ntBASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 DUX4L8-201ENST00000629013 1275 ntBASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 DUX4L3-201ENST00000630187 1275 ntBASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 DUX4L7-201ENST00000630678 1275 ntBASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 DUX4L5-201ENST00000630834 1275 ntBASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 OXCT2P1-201ENST00000447263 1535 ntBASIC23.13■■□□□ 1.29
PCDHB5Q9Y5E4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB5Q9Y5E4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PCDHB5Q9Y5E4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB5Q9Y5E4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PCDHB5Q9Y5E4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDHB5Q9Y5E4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHB5Q9Y5E4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB5Q9Y5E4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHB5Q9Y5E4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PCDHB5Q9Y5E4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB5Q9Y5E4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PCDHB5Q9Y5E4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB5Q9Y5E4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.11■■□□□ 1.29
PCDHB5Q9Y5E4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHB5Q9Y5E4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHB5Q9Y5E4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PCDHB5Q9Y5E4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB5Q9Y5E4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHB5Q9Y5E4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PCDHB5Q9Y5E4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHB5Q9Y5E4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB5Q9Y5E4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.1■■□□□ 1.29
PCDHB5Q9Y5E4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB5Q9Y5E4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PCDHB5Q9Y5E4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 KRT18P14-201ENST00000534205 1250 ntBASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 TERF1P2-201ENST00000583350 1212 ntBASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 SMUG1P1-201ENST00000590640 811 ntBASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB5Q9Y5E4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB5Q9Y5E4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
PCDHB5Q9Y5E4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHB5Q9Y5E4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHB5Q9Y5E4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 KRT18P5-201ENST00000436075 1291 ntBASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 BX005040.4-201ENST00000637145 1518 ntBASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB5Q9Y5E4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB5Q9Y5E4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB5Q9Y5E4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHB5Q9Y5E4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms