Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afjQ8R1M2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afjQ8R1M2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
H2afjQ8R1M2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
H2afjQ8R1M2 Gm43530-201ENSMUST00000195920 274 ntBASIC18.02■□□□□ 0.48
H2afjQ8R1M2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
H2afjQ8R1M2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
H2afjQ8R1M2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Mir6236-201ENSMUST00000184437 123 ntBASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
H2afjQ8R1M2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afjQ8R1M2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
H2afjQ8R1M2 Rps24-207ENSMUST00000224568 714 ntBASIC18■□□□□ 0.47
H2afjQ8R1M2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18■□□□□ 0.47
H2afjQ8R1M2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afjQ8R1M2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afjQ8R1M2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afjQ8R1M2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18■□□□□ 0.47
H2afjQ8R1M2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H2afjQ8R1M2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
H2afjQ8R1M2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H2afjQ8R1M2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Gm22238-201ENSMUST00000175222 88 ntBASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afjQ8R1M2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
H2afjQ8R1M2 Golph3-205ENSMUST00000228671 2842 ntBASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Gm45102-201ENSMUST00000207427 857 ntBASIC17.96■□□□□ 0.47
H2afjQ8R1M2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afjQ8R1M2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Gm14117-201ENSMUST00000122417 843 ntBASIC17.95■□□□□ 0.46
H2afjQ8R1M2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afjQ8R1M2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afjQ8R1M2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afjQ8R1M2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afjQ8R1M2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H2afjQ8R1M2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afjQ8R1M2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H2afjQ8R1M2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afjQ8R1M2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms