Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ebf4Q8K4J2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf4Q8K4J2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf4Q8K4J2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ebf4Q8K4J2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf4Q8K4J2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf4Q8K4J2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf4Q8K4J2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf4Q8K4J2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ebf4Q8K4J2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ebf4Q8K4J2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf4Q8K4J2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ebf4Q8K4J2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf4Q8K4J2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf4Q8K4J2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf4Q8K4J2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf4Q8K4J2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf4Q8K4J2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ebf4Q8K4J2 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ebf4Q8K4J2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.71■□□□□ 0.43
Ebf4Q8K4J2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ebf4Q8K4J2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ebf4Q8K4J2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ebf4Q8K4J2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ebf4Q8K4J2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf4Q8K4J2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ebf4Q8K4J2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ebf4Q8K4J2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf4Q8K4J2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf4Q8K4J2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.7■□□□□ 0.42
Ebf4Q8K4J2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf4Q8K4J2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ebf4Q8K4J2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ebf4Q8K4J2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Gm14523-201ENSMUST00000117260 558 ntBASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf4Q8K4J2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ebf4Q8K4J2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms