Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Shtn1Q8K2Q9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.03■■□□□ 1.28
Shtn1Q8K2Q9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shtn1Q8K2Q9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shtn1Q8K2Q9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Shtn1Q8K2Q9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Gm7290-201ENSMUST00000104990 617 ntBASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Gm12918-201ENSMUST00000120234 636 ntBASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Gm15710-201ENSMUST00000121821 636 ntBASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Gm5075-201ENSMUST00000196916 622 ntBASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.02■■□□□ 1.28
Shtn1Q8K2Q9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shtn1Q8K2Q9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shtn1Q8K2Q9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shtn1Q8K2Q9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shtn1Q8K2Q9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.01■■□□□ 1.27
Shtn1Q8K2Q9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.01■■□□□ 1.27
Shtn1Q8K2Q9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.01■■□□□ 1.27
Shtn1Q8K2Q9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Shtn1Q8K2Q9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Shtn1Q8K2Q9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Shtn1Q8K2Q9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Shtn1Q8K2Q9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Shtn1Q8K2Q9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23■■□□□ 1.27
Shtn1Q8K2Q9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Shtn1Q8K2Q9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Shtn1Q8K2Q9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Shtn1Q8K2Q9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Shtn1Q8K2Q9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Gm6211-202ENSMUST00000167849 925 ntBASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Shtn1Q8K2Q9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Shtn1Q8K2Q9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Shtn1Q8K2Q9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.98■■□□□ 1.27
Shtn1Q8K2Q9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Shtn1Q8K2Q9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Shtn1Q8K2Q9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Shtn1Q8K2Q9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Shtn1Q8K2Q9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Shtn1Q8K2Q9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Shtn1Q8K2Q9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Shtn1Q8K2Q9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Shtn1Q8K2Q9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Shtn1Q8K2Q9 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.97■■□□□ 1.27
Shtn1Q8K2Q9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Mir6982-201ENSMUST00000184354 68 ntBASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Gm10812-201ENSMUST00000099864 546 ntBASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shtn1Q8K2Q9 Gm13534-201ENSMUST00000121169 513 ntBASIC22.95■■□□□ 1.26
Shtn1Q8K2Q9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Shtn1Q8K2Q9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Shtn1Q8K2Q9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Shtn1Q8K2Q9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Shtn1Q8K2Q9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Shtn1Q8K2Q9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Shtn1Q8K2Q9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.93■■□□□ 1.26
Shtn1Q8K2Q9 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.93■■□□□ 1.26
Shtn1Q8K2Q9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms