Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf7Q8BTV2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf7Q8BTV2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Gm43530-201ENSMUST00000195920 274 ntBASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Gm45102-201ENSMUST00000207427 857 ntBASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf7Q8BTV2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf7Q8BTV2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf7Q8BTV2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf7Q8BTV2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf7Q8BTV2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpsf7Q8BTV2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpsf7Q8BTV2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpsf7Q8BTV2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf7Q8BTV2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf7Q8BTV2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.39■□□□□ 0.69
Cpsf7Q8BTV2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cpsf7Q8BTV2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf7Q8BTV2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf7Q8BTV2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf7Q8BTV2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cpsf7Q8BTV2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf7Q8BTV2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Etf1-202ENSMUST00000180351 108 ntBASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 AA386476-201ENSMUST00000098781 1665 ntBASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf7Q8BTV2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf7Q8BTV2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms