Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nop53Q8BK35 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop53Q8BK35 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop53Q8BK35 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop53Q8BK35 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Nop53Q8BK35 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.78■□□□□ 0.92
Nop53Q8BK35 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop53Q8BK35 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop53Q8BK35 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nop53Q8BK35 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.77■□□□□ 0.92
Nop53Q8BK35 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nop53Q8BK35 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nop53Q8BK35 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nop53Q8BK35 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.77■□□□□ 0.92
Nop53Q8BK35 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nop53Q8BK35 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nop53Q8BK35 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.77■□□□□ 0.92
Nop53Q8BK35 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nop53Q8BK35 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.77■□□□□ 0.92
Nop53Q8BK35 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Nop53Q8BK35 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nop53Q8BK35 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nop53Q8BK35 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.76■□□□□ 0.91
Nop53Q8BK35 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nop53Q8BK35 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nop53Q8BK35 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.76■□□□□ 0.91
Nop53Q8BK35 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nop53Q8BK35 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
Nop53Q8BK35 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nop53Q8BK35 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nop53Q8BK35 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nop53Q8BK35 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nop53Q8BK35 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.75■□□□□ 0.91
Nop53Q8BK35 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nop53Q8BK35 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Nop53Q8BK35 Gm21956-201ENSMUST00000179946 522 ntBASIC20.75■□□□□ 0.91
Nop53Q8BK35 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.75■□□□□ 0.91
Nop53Q8BK35 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.75■□□□□ 0.91
Nop53Q8BK35 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Nop53Q8BK35 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nop53Q8BK35 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nop53Q8BK35 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nop53Q8BK35 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.74■□□□□ 0.91
Nop53Q8BK35 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nop53Q8BK35 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nop53Q8BK35 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.74■□□□□ 0.91
Nop53Q8BK35 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nop53Q8BK35 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nop53Q8BK35 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nop53Q8BK35 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Nop53Q8BK35 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nop53Q8BK35 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nop53Q8BK35 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nop53Q8BK35 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nop53Q8BK35 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nop53Q8BK35 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nop53Q8BK35 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nop53Q8BK35 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.73■□□□□ 0.91
Nop53Q8BK35 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nop53Q8BK35 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nop53Q8BK35 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nop53Q8BK35 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nop53Q8BK35 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nop53Q8BK35 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nop53Q8BK35 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.72■□□□□ 0.91
Nop53Q8BK35 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Nop53Q8BK35 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nop53Q8BK35 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.72■□□□□ 0.91
Nop53Q8BK35 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Nop53Q8BK35 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.91
Nop53Q8BK35 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nop53Q8BK35 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nop53Q8BK35 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nop53Q8BK35 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.7■□□□□ 0.9
Nop53Q8BK35 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nop53Q8BK35 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.7■□□□□ 0.9
Nop53Q8BK35 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nop53Q8BK35 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nop53Q8BK35 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nop53Q8BK35 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nop53Q8BK35 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nop53Q8BK35 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.69■□□□□ 0.9
Nop53Q8BK35 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.69■□□□□ 0.9
Nop53Q8BK35 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.69■□□□□ 0.9
Nop53Q8BK35 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nop53Q8BK35 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms