Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Rtl1Q7M732 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC35.1■■■■□ 3.21
Rtl1Q7M732 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC35.1■■■■□ 3.21
Rtl1Q7M732 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC35.1■■■■□ 3.21
Rtl1Q7M732 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Rtl1Q7M732 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Rtl1Q7M732 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC35.09■■■■□ 3.21
Rtl1Q7M732 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC35.09■■■■□ 3.21
Rtl1Q7M732 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Rtl1Q7M732 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC35.09■■■■□ 3.21
Rtl1Q7M732 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Rtl1Q7M732 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC35.09■■■■□ 3.21
Rtl1Q7M732 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Rtl1Q7M732 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC35.08■■■■□ 3.21
Rtl1Q7M732 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Rtl1Q7M732 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC35.08■■■■□ 3.21
Rtl1Q7M732 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC35.08■■■■□ 3.21
Rtl1Q7M732 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Rtl1Q7M732 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Rtl1Q7M732 Gm13146-201ENSMUST00000118508 780 ntBASIC35.07■■■■□ 3.2
Rtl1Q7M732 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
Rtl1Q7M732 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC35.07■■■■□ 3.2
Rtl1Q7M732 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC35.07■■■■□ 3.2
Rtl1Q7M732 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC35.07■■■■□ 3.2
Rtl1Q7M732 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Rtl1Q7M732 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
Rtl1Q7M732 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Rtl1Q7M732 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Rtl1Q7M732 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Rtl1Q7M732 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Rtl1Q7M732 AA386476-201ENSMUST00000098781 1665 ntBASIC35.05■■■■□ 3.2
Rtl1Q7M732 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC35.05■■■■□ 3.2
Rtl1Q7M732 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC35.05■■■■□ 3.2
Rtl1Q7M732 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC35.05■■■■□ 3.2
Rtl1Q7M732 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC35.05■■■■□ 3.2
Rtl1Q7M732 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Rtl1Q7M732 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
Rtl1Q7M732 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Rtl1Q7M732 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rtl1Q7M732 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Rtl1Q7M732 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rtl1Q7M732 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Rtl1Q7M732 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
Rtl1Q7M732 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC35.02■■■■□ 3.2
Rtl1Q7M732 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
Rtl1Q7M732 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC35.02■■■■□ 3.2
Rtl1Q7M732 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
Rtl1Q7M732 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC35.02■■■■□ 3.2
Rtl1Q7M732 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC35.02■■■■□ 3.2
Rtl1Q7M732 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC35.01■■■■□ 3.2
Rtl1Q7M732 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC35.01■■■■□ 3.2
Rtl1Q7M732 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Rtl1Q7M732 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC35.01■■■■□ 3.2
Rtl1Q7M732 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
Rtl1Q7M732 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
Rtl1Q7M732 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
Rtl1Q7M732 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC35.01■■■■□ 3.19
Rtl1Q7M732 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.19
Rtl1Q7M732 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Rtl1Q7M732 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC34.99■■■■□ 3.19
Rtl1Q7M732 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Rtl1Q7M732 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Rtl1Q7M732 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC34.99■■■■□ 3.19
Rtl1Q7M732 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Rtl1Q7M732 Gm38205-201ENSMUST00000192243 258 ntBASIC34.98■■■■□ 3.19
Rtl1Q7M732 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC34.98■■■■□ 3.19
Rtl1Q7M732 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
Rtl1Q7M732 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Rtl1Q7M732 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC34.96■■■■□ 3.19
Rtl1Q7M732 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC34.96■■■■□ 3.19
Rtl1Q7M732 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
Rtl1Q7M732 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC34.95■■■■□ 3.19
Rtl1Q7M732 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC34.95■■■■□ 3.19
Rtl1Q7M732 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Rtl1Q7M732 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Rtl1Q7M732 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.18
Rtl1Q7M732 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
Rtl1Q7M732 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC34.94■■■■□ 3.18
Rtl1Q7M732 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC34.94■■■■□ 3.18
Rtl1Q7M732 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rtl1Q7M732 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC34.93■■■■□ 3.18
Rtl1Q7M732 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rtl1Q7M732 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rtl1Q7M732 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rtl1Q7M732 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rtl1Q7M732 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Rtl1Q7M732 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Rtl1Q7M732 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Rtl1Q7M732 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC34.91■■■■□ 3.18
Rtl1Q7M732 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC34.91■■■■□ 3.18
Rtl1Q7M732 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC34.91■■■■□ 3.18
Rtl1Q7M732 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Rtl1Q7M732 Gm12933-201ENSMUST00000120203 872 ntBASIC34.91■■■■□ 3.18
Rtl1Q7M732 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Rtl1Q7M732 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Rtl1Q7M732 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
Rtl1Q7M732 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Rtl1Q7M732 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
Rtl1Q7M732 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC34.9■■■■□ 3.18
Rtl1Q7M732 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms