Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom1Q5SX79 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Shroom1Q5SX79 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom1Q5SX79 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom1Q5SX79 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Shroom1Q5SX79 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom1Q5SX79 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Shroom1Q5SX79 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.7■□□□□ 0.9
Shroom1Q5SX79 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom1Q5SX79 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shroom1Q5SX79 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Shroom1Q5SX79 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Shroom1Q5SX79 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.69■□□□□ 0.9
Shroom1Q5SX79 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Shroom1Q5SX79 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom1Q5SX79 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.69■□□□□ 0.9
Shroom1Q5SX79 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Shroom1Q5SX79 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom1Q5SX79 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shroom1Q5SX79 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shroom1Q5SX79 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shroom1Q5SX79 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shroom1Q5SX79 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shroom1Q5SX79 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.68■□□□□ 0.9
Shroom1Q5SX79 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shroom1Q5SX79 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shroom1Q5SX79 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 Gm13234-201ENSMUST00000120010 747 ntBASIC20.67■□□□□ 0.9
Shroom1Q5SX79 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 Gm9988-201ENSMUST00000069786 435 ntBASIC20.67■□□□□ 0.9
Shroom1Q5SX79 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Shroom1Q5SX79 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Golph3-202ENSMUST00000226517 2359 ntBASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shroom1Q5SX79 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shroom1Q5SX79 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms