Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
ABCA4P78363 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA4P78363 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA4P78363 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA4P78363 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.93■□□□□ 0.62
ABCA4P78363 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.93■□□□□ 0.62
ABCA4P78363 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.93■□□□□ 0.62
ABCA4P78363 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA4P78363 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA4P78363 AL355802.2-201ENST00000402069 882 ntBASIC18.93■□□□□ 0.62
ABCA4P78363 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.93■□□□□ 0.62
ABCA4P78363 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA4P78363 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.93■□□□□ 0.62
ABCA4P78363 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA4P78363 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ABCA4P78363 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCA4P78363 AC142086.2-201ENST00000569753 217 ntBASIC18.92■□□□□ 0.62
ABCA4P78363 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA4P78363 AC087239.1-201ENST00000622671 572 ntBASIC18.92■□□□□ 0.62
ABCA4P78363 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA4P78363 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ABCA4P78363 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCA4P78363 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA4P78363 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCA4P78363 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.91■□□□□ 0.62
ABCA4P78363 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCA4P78363 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCA4P78363 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA4P78363 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.91■□□□□ 0.62
ABCA4P78363 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ABCA4P78363 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA4P78363 LINC02228-203ENST00000641970 1355 ntBASIC18.91■□□□□ 0.62
ABCA4P78363 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA4P78363 KRT18P11-201ENST00000435214 1283 ntBASIC18.91■□□□□ 0.62
ABCA4P78363 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA4P78363 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ABCA4P78363 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCA4P78363 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCA4P78363 AC006970.2-201ENST00000450065 779 ntBASIC18.9■□□□□ 0.62
ABCA4P78363 TSPY20P-201ENST00000450910 630 ntBASIC18.9■□□□□ 0.62
ABCA4P78363 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCA4P78363 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCA4P78363 AC073111.5-205ENST00000641717 521 ntBASIC18.9■□□□□ 0.62
ABCA4P78363 LINC01124-201ENST00000409786 2117 ntBASIC18.9■□□□□ 0.62
ABCA4P78363 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA4P78363 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCA4P78363 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCA4P78363 MFSD11-216ENST00000590393 1141 ntBASIC18.9■□□□□ 0.62
ABCA4P78363 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCA4P78363 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA4P78363 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA4P78363 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
ABCA4P78363 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.89■□□□□ 0.62
ABCA4P78363 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.89■□□□□ 0.62
ABCA4P78363 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCA4P78363 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA4P78363 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA4P78363 MIR663A-201ENST00000385250 93 ntBASIC18.89■□□□□ 0.61
ABCA4P78363 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA4P78363 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.89■□□□□ 0.61
ABCA4P78363 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA4P78363 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.89■□□□□ 0.61
ABCA4P78363 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA4P78363 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA4P78363 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA4P78363 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA4P78363 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.89■□□□□ 0.61
ABCA4P78363 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA4P78363 AC142381.3-201ENST00000568208 1670 ntBASIC18.89■□□□□ 0.61
ABCA4P78363 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA4P78363 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA4P78363 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.88■□□□□ 0.61
ABCA4P78363 NCF1B-203ENST00000435988 1254 ntBASIC18.88■□□□□ 0.61
ABCA4P78363 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.88■□□□□ 0.61
ABCA4P78363 AC093827.2-201ENST00000512654 315 ntBASIC18.88■□□□□ 0.61
ABCA4P78363 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA4P78363 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA4P78363 GPX1P1-201ENST00000388829 606 ntBASIC18.88■□□□□ 0.61
ABCA4P78363 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ABCA4P78363 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.88■□□□□ 0.61
ABCA4P78363 BID-214ENST00000617586 542 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCA4P78363 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ABCA4P78363 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCA4P78363 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCA4P78363 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA4P78363 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA4P78363 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.87■□□□□ 0.61
ABCA4P78363 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.87■□□□□ 0.61
ABCA4P78363 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA4P78363 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCA4P78363 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA4P78363 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA4P78363 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA4P78363 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA4P78363 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.86■□□□□ 0.61
ABCA4P78363 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.86■□□□□ 0.61
ABCA4P78363 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCA4P78363 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
ABCA4P78363 AL109923.1-201ENST00000618799 583 ntBASIC18.86■□□□□ 0.61
ABCA4P78363 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms