Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 HSP42YDR171W 1128 nt5.76□□□□□ -1.49
MSH4P40965 LSM4YER112W 564 nt5.76□□□□□ -1.49
MSH4P40965 SDT1YGL224C 843 nt5.76□□□□□ -1.49
MSH4P40965 YGR115CYGR115C 780 nt5.76□□□□□ -1.49
MSH4P40965 FOL2YGR267C 732 nt5.76□□□□□ -1.49
MSH4P40965 YIL171W-AYIL171W-A 453 nt5.76□□□□□ -1.49
MSH4P40965 APQ13YJL075C 417 nt5.76□□□□□ -1.49
MSH4P40965 NIT2YJL126W 924 nt5.76□□□□□ -1.49
MSH4P40965 YJL220WYJL220W 453 nt5.76□□□□□ -1.49
MSH4P40965 IME1YJR094C 1083 nt5.76□□□□□ -1.49
MSH4P40965 YAL044W-AYAL044W-A 333 nt5.76□□□□□ -1.49
MSH4P40965 ICS2YBR157C 768 nt5.76□□□□□ -1.49
MSH4P40965 TRS20YBR254C 528 nt5.76□□□□□ -1.49
MSH4P40965 BCS1YDR375C 1371 nt5.76□□□□□ -1.49
MSH4P40965 LAP3YNL239W 1365 nt5.76□□□□□ -1.49
MSH4P40965 THP1YOL072W 1368 nt5.76□□□□□ -1.49
MSH4P40965 GPR1YDL035C 2886 nt5.76□□□□□ -1.49
MSH4P40965 MTH1YDR277C 1302 nt5.75□□□□□ -1.49
MSH4P40965 TUP1YCR084C 2142 nt5.75□□□□□ -1.49
MSH4P40965 ESF1YDR365C 1887 nt5.75□□□□□ -1.49
MSH4P40965 RSM28YDR494W 1086 nt5.75□□□□□ -1.49
MSH4P40965 YFR009W-AYFR009W-A 258 nt5.75□□□□□ -1.49
MSH4P40965 YHR212W-AYHR212W-A 204 nt5.75□□□□□ -1.49
MSH4P40965 VPS25YJR102C 609 nt5.75□□□□□ -1.49
MSH4P40965 KTI12YKL110C 942 nt5.75□□□□□ -1.49
MSH4P40965 YAR061WYAR061W 204 nt5.75□□□□□ -1.49
MSH4P40965 YNR061CYNR061C 660 nt5.75□□□□□ -1.49
MSH4P40965 HAP1YLR256W 4509 nt5.75□□□□□ -1.49
MSH4P40965 PRR1YKL116C 1557 nt5.75□□□□□ -1.49
MSH4P40965 SRB7YDR308C 423 nt5.74□□□□□ -1.49
MSH4P40965 FAU1YER183C 636 nt5.74□□□□□ -1.49
MSH4P40965 GIC1YHR061C 945 nt5.74□□□□□ -1.49
MSH4P40965 NSG1YHR133C 876 nt5.74□□□□□ -1.49
MSH4P40965 RPN13YLR421C 471 nt5.74□□□□□ -1.49
MSH4P40965 SAS2YMR127C 1017 nt5.74□□□□□ -1.49
MSH4P40965 ATG34YOL083W 1239 nt5.74□□□□□ -1.49
MSH4P40965 MED7YOL135C 669 nt5.74□□□□□ -1.49
MSH4P40965 PNT1YOR266W 1272 nt5.74□□□□□ -1.49
MSH4P40965 PNG1YPL096W 1092 nt5.74□□□□□ -1.49
MSH4P40965 SPP381YBR152W 876 nt5.74□□□□□ -1.49
MSH4P40965 YTM1YOR272W 1383 nt5.74□□□□□ -1.49
MSH4P40965 KTR7YIL085C 1554 nt5.73□□□□□ -1.49
MSH4P40965 SPT14YPL175W 1359 nt5.73□□□□□ -1.49
MSH4P40965 DAS2YDR020C 699 nt5.73□□□□□ -1.49
MSH4P40965 PET100YDR079W 336 nt5.73□□□□□ -1.49
MSH4P40965 YHL009W-AYHL009W-A 1242 nt5.73□□□□□ -1.49
MSH4P40965 RPL27AYHR010W 411 nt5.73□□□□□ -1.49
MSH4P40965 SRP21YKL122C 504 nt5.73□□□□□ -1.49
MSH4P40965 ELO3YLR372W 1038 nt5.73□□□□□ -1.49
MSH4P40965 YNL013CYNL013C 378 nt5.73□□□□□ -1.49
MSH4P40965 snR11snR11 258 nt5.73□□□□□ -1.49
MSH4P40965 FIG1YBR040W 897 nt5.73□□□□□ -1.49
MSH4P40965 YPR012WYPR012W 255 nt5.73□□□□□ -1.49
MSH4P40965 CCL1YPR025C 1182 nt5.73□□□□□ -1.49
MSH4P40965 SEC9YGR009C 1956 nt5.73□□□□□ -1.49
MSH4P40965 CUE2YKL090W 1332 nt5.73□□□□□ -1.49
MSH4P40965 YCR001WYCR001W 315 nt5.72□□□□□ -1.49
MSH4P40965 COQ4YDR204W 1008 nt5.72□□□□□ -1.49
MSH4P40965 MTC7YEL033W 420 nt5.72□□□□□ -1.49
MSH4P40965 FRA2YGL220W 363 nt5.72□□□□□ -1.49
MSH4P40965 SRB5YGR104C 924 nt5.72□□□□□ -1.49
MSH4P40965 DAM1YGR113W 1032 nt5.72□□□□□ -1.49
MSH4P40965 SPL2YHR136C 447 nt5.72□□□□□ -1.49
MSH4P40965 RPI1YIL119C 1224 nt5.72□□□□□ -1.49
MSH4P40965 FUN19YAL034C 1242 nt5.72□□□□□ -1.49
MSH4P40965 SFH1YLR321C 1281 nt5.72□□□□□ -1.49
MSH4P40965 RPP0YLR340W 939 nt5.72□□□□□ -1.49
MSH4P40965 ECM13YBL043W 774 nt5.72□□□□□ -1.49
MSH4P40965 AIM39YOL053W 1188 nt5.72□□□□□ -1.49
MSH4P40965 ISU2YOR226C 471 nt5.72□□□□□ -1.49
MSH4P40965 UAF30YOR295W 687 nt5.72□□□□□ -1.49
MSH4P40965 YPL114WYPL114W 420 nt5.72□□□□□ -1.49
MSH4P40965 YPL261CYPL261C 309 nt5.72□□□□□ -1.49
MSH4P40965 MCH4YOL119C 1506 nt5.72□□□□□ -1.49
MSH4P40965 KRS1YDR037W 1776 nt5.72□□□□□ -1.49
MSH4P40965 CAF4YKR036C 1932 nt5.72□□□□□ -1.49
MSH4P40965 ARN1YHL040C 1884 nt5.71□□□□□ -1.5
MSH4P40965 SEG2YKL105C 3399 nt5.71□□□□□ -1.5
MSH4P40965 UPS2YLR168C 693 nt5.71□□□□□ -1.5
MSH4P40965 YLR334CYLR334C 381 nt5.71□□□□□ -1.5
MSH4P40965 SCW10YMR305C 1170 nt5.71□□□□□ -1.5
MSH4P40965 MPP6YNR024W 561 nt5.71□□□□□ -1.5
MSH4P40965 SHE3YBR130C 1278 nt5.71□□□□□ -1.5
MSH4P40965 KTR6YPL053C 1341 nt5.71□□□□□ -1.5
MSH4P40965 CPS1YJL172W 1731 nt5.71□□□□□ -1.5
MSH4P40965 NPL4YBR170C 1743 nt5.71□□□□□ -1.5
MSH4P40965 SFI1YLL003W 2841 nt5.7□□□□□ -1.5
MSH4P40965 TPS3YMR261C 3165 nt5.7□□□□□ -1.5
MSH4P40965 NPY1YGL067W 1155 nt5.7□□□□□ -1.5
MSH4P40965 RSR1YGR152C 819 nt5.7□□□□□ -1.5
MSH4P40965 PEX21YGR239C 867 nt5.7□□□□□ -1.5
MSH4P40965 YIL163CYIL163C 354 nt5.7□□□□□ -1.5
MSH4P40965 BET4YJL031C 984 nt5.7□□□□□ -1.5
MSH4P40965 AUR1YKL004W 1206 nt5.7□□□□□ -1.5
MSH4P40965 SWD2YKL018W 990 nt5.7□□□□□ -1.5
MSH4P40965 PFK27YOL136C 1194 nt5.7□□□□□ -1.5
MSH4P40965 CIN2YPL241C 807 nt5.7□□□□□ -1.5
MSH4P40965 SUM1YDR310C 3189 nt5.7□□□□□ -1.5
MSH4P40965 BLM10YFL007W 6432 nt5.7□□□□□ -1.5
MSH4P40965 PCA1YBR295W 3651 nt5.7□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 42.2 ms