Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 TIF34YMR146C 1044 nt5.15□□□□□ -1.59
SSM4P40318 HPC2YBR215W 1878 nt5.14□□□□□ -1.59
SSM4P40318 DIN7YDR263C 1293 nt5.14□□□□□ -1.59
SSM4P40318 MPC1YGL080W 393 nt5.14□□□□□ -1.59
SSM4P40318 RFC3YNL290W 1023 nt5.14□□□□□ -1.59
SSM4P40318 FAA3YIL009W 2085 nt5.14□□□□□ -1.59
SSM4P40318 MDL1YLR188W 2088 nt5.13□□□□□ -1.59
SSM4P40318 KIN3YAR018C 1308 nt5.13□□□□□ -1.59
SSM4P40318 BUD30YDL151C 582 nt5.13□□□□□ -1.59
SSM4P40318 CIR1YGR207C 786 nt5.13□□□□□ -1.59
SSM4P40318 MTM1YGR257C 1101 nt5.13□□□□□ -1.59
SSM4P40318 YIL163CYIL163C 354 nt5.13□□□□□ -1.59
SSM4P40318 RPL22AYLR061W 366 nt5.13□□□□□ -1.59
SSM4P40318 BLS1YLR408C 369 nt5.13□□□□□ -1.59
SSM4P40318 FBP26YJL155C 1359 nt5.12□□□□□ -1.59
SSM4P40318 SDS3YIL084C 984 nt5.12□□□□□ -1.59
SSM4P40318 YMR075C-AYMR075C-A 366 nt5.12□□□□□ -1.59
SSM4P40318 MRM1YOR201C 1239 nt5.12□□□□□ -1.59
SSM4P40318 CBP3YPL215W 1008 nt5.12□□□□□ -1.59
SSM4P40318 PXA1YPL147W 2613 nt5.12□□□□□ -1.59
SSM4P40318 SEN1YLR430W 6696 nt5.11□□□□□ -1.59
SSM4P40318 KTR7YIL085C 1554 nt5.11□□□□□ -1.59
SSM4P40318 YDL026WYDL026W 312 nt5.11□□□□□ -1.59
SSM4P40318 BSC1YDL037C 987 nt5.11□□□□□ -1.59
SSM4P40318 COX4YGL187C 468 nt5.11□□□□□ -1.59
SSM4P40318 TMA19YKL056C 504 nt5.11□□□□□ -1.59
SSM4P40318 GTT2YLL060C 702 nt5.11□□□□□ -1.59
SSM4P40318 YLR125WYLR125W 411 nt5.11□□□□□ -1.59
SSM4P40318 YMR306C-AYMR306C-A 390 nt5.11□□□□□ -1.59
SSM4P40318 TED1YIL039W 1422 nt5.11□□□□□ -1.59
SSM4P40318 BUD27YFL023W 2391 nt5.1□□□□□ -1.59
SSM4P40318 YER067C-AYER067C-A 324 nt5.1□□□□□ -1.59
SSM4P40318 YIL089WYIL089W 618 nt5.1□□□□□ -1.59
SSM4P40318 YMR315WYMR315W 1050 nt5.1□□□□□ -1.59
SSM4P40318 SPS4YOR313C 1017 nt5.1□□□□□ -1.59
SSM4P40318 GPI2YPL076W 843 nt5.1□□□□□ -1.59
SSM4P40318 CMR3YPR013C 954 nt5.1□□□□□ -1.59
SSM4P40318 RSF2YJR127C 4143 nt5.1□□□□□ -1.59
SSM4P40318 ZDS1YMR273C 2748 nt5.1□□□□□ -1.59
SSM4P40318 IME4YGL192W 1803 nt5.1□□□□□ -1.59
SSM4P40318 YGR204C-AYGR204C-A 114 nt5.09□□□□□ -1.59
SSM4P40318 MRPL6YHR147C 645 nt5.09□□□□□ -1.59
SSM4P40318 YMR084WYMR084W 789 nt5.09□□□□□ -1.59
SSM4P40318 RIM11YMR139W 1113 nt5.09□□□□□ -1.59
SSM4P40318 FDH1YOR388C 1131 nt5.09□□□□□ -1.59
SSM4P40318 AVT7YIL088C 1473 nt5.08□□□□□ -1.6
SSM4P40318 SEC53YFL045C 765 nt5.08□□□□□ -1.6
SSM4P40318 YLR462WYLR462W 609 nt5.08□□□□□ -1.6
SSM4P40318 TRM13YOL125W 1431 nt5.08□□□□□ -1.6
SSM4P40318 SHQ1YIL104C 1524 nt5.08□□□□□ -1.6
SSM4P40318 RAD4YER162C 2265 nt5.07□□□□□ -1.6
SSM4P40318 RIM21YNL294C 1602 nt5.07□□□□□ -1.6
SSM4P40318 PSE1YMR308C 3270 nt5.07□□□□□ -1.6
SSM4P40318 snR63snR63 255 nt5.07□□□□□ -1.6
SSM4P40318 HRT3YLR097C 1035 nt5.07□□□□□ -1.6
SSM4P40318 YPT7YML001W 627 nt5.07□□□□□ -1.6
SSM4P40318 VPS71YML041C 843 nt5.07□□□□□ -1.6
SSM4P40318 MED7YOL135C 669 nt5.07□□□□□ -1.6
SSM4P40318 YSA1YBR111C 696 nt5.07□□□□□ -1.6
SSM4P40318 ACT1YFL039C 1128 nt5.06□□□□□ -1.6
SSM4P40318 SOP4YJL192C 705 nt5.06□□□□□ -1.6
SSM4P40318 TTI2YJR136C 1266 nt5.06□□□□□ -1.6
SSM4P40318 CDC14YFR028C 1656 nt5.06□□□□□ -1.6
SSM4P40318 ELM1YKL048C 1923 nt5.06□□□□□ -1.6
SSM4P40318 FKH2YNL068C 2589 nt5.06□□□□□ -1.6
SSM4P40318 ALG2YGL065C 1512 nt5.05□□□□□ -1.6
SSM4P40318 TDA11YHR159W 1515 nt5.05□□□□□ -1.6
SSM4P40318 YGL193CYGL193C 312 nt5.05□□□□□ -1.6
SSM4P40318 OAR1YKL055C 837 nt5.05□□□□□ -1.6
SSM4P40318 UPS2YLR168C 693 nt5.05□□□□□ -1.6
SSM4P40318 POL12YBL035C 2118 nt5.05□□□□□ -1.6
SSM4P40318 OPY1YBR129C 987 nt5.05□□□□□ -1.6
SSM4P40318 TYR1YBR166C 1359 nt5.05□□□□□ -1.6
SSM4P40318 CHK1YBR274W 1584 nt5.05□□□□□ -1.6
SSM4P40318 GPR1YDL035C 2886 nt5.04□□□□□ -1.6
SSM4P40318 DAM1YGR113W 1032 nt5.04□□□□□ -1.6
SSM4P40318 BMT5YIL096C 1011 nt5.04□□□□□ -1.6
SSM4P40318 PLP2YOR281C 861 nt5.04□□□□□ -1.6
SSM4P40318 HCA4YJL033W 2313 nt5.04□□□□□ -1.6
SSM4P40318 BOI2YER114C 3123 nt5.03□□□□□ -1.6
SSM4P40318 DAS2YDR020C 699 nt5.03□□□□□ -1.6
SSM4P40318 RPS11AYDR025W 471 nt5.03□□□□□ -1.6
SSM4P40318 JLP1YLL057C 1239 nt5.03□□□□□ -1.6
SSM4P40318 YOL019W-AYOL019W-A 153 nt5.03□□□□□ -1.6
SSM4P40318 RNR1YER070W 2667 nt5.03□□□□□ -1.6
SSM4P40318 NGL3YML118W 1518 nt5.03□□□□□ -1.6
SSM4P40318 FZO1YBR179C 2568 nt5.03□□□□□ -1.6
SSM4P40318 ECM22YLR228C 2445 nt5.02□□□□□ -1.61
SSM4P40318 LRG1YDL240W 3054 nt5.02□□□□□ -1.61
SSM4P40318 RPA14YDR156W 414 nt5.02□□□□□ -1.61
SSM4P40318 VMA22YHR060W 546 nt5.02□□□□□ -1.61
SSM4P40318 NIS1YNL078W 1224 nt5.02□□□□□ -1.61
SSM4P40318 NPL4YBR170C 1743 nt5.02□□□□□ -1.61
SSM4P40318 CMK1YFR014C 1341 nt5.02□□□□□ -1.61
SSM4P40318 HMS1YOR032C 1305 nt5.02□□□□□ -1.61
SSM4P40318 MEF2YJL102W 2460 nt5.02□□□□□ -1.61
SSM4P40318 TRE1YPL176C 2352 nt5.02□□□□□ -1.61
SSM4P40318 SOF1YLL011W 1470 nt5.02□□□□□ -1.61
SSM4P40318 TRS85YDR108W 2097 nt5.01□□□□□ -1.61
SSM4P40318 MRP13YGR084C 1020 nt5.01□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms