Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.39■□□□□ 0.7
Hoxb3P09026 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxb3P09026 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Hoxb3P09026 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.39■□□□□ 0.69
Hoxb3P09026 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb3P09026 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.39■□□□□ 0.69
Hoxb3P09026 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb3P09026 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.39■□□□□ 0.69
Hoxb3P09026 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb3P09026 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb3P09026 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb3P09026 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb3P09026 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hoxb3P09026 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxb3P09026 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb3P09026 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Hoxb3P09026 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Hoxb3P09026 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb3P09026 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Hoxb3P09026 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Hoxb3P09026 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb3P09026 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.38■□□□□ 0.69
Hoxb3P09026 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxb3P09026 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hoxb3P09026 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxb3P09026 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxb3P09026 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxb3P09026 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxb3P09026 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Hoxb3P09026 Gm15565-201ENSMUST00000118890 427 ntBASIC19.36■□□□□ 0.69
Hoxb3P09026 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxb3P09026 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.36■□□□□ 0.69
Hoxb3P09026 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.36■□□□□ 0.69
Hoxb3P09026 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxb3P09026 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxb3P09026 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.36■□□□□ 0.69
Hoxb3P09026 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb3P09026 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb3P09026 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Hoxb3P09026 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.35■□□□□ 0.69
Hoxb3P09026 Gm20049-201ENSMUST00000219950 730 ntBASIC19.35■□□□□ 0.69
Hoxb3P09026 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb3P09026 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.35■□□□□ 0.69
Hoxb3P09026 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb3P09026 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxb3P09026 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxb3P09026 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Hoxb3P09026 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.34■□□□□ 0.69
Hoxb3P09026 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxb3P09026 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxb3P09026 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxb3P09026 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxb3P09026 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxb3P09026 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxb3P09026 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
Hoxb3P09026 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Hoxb3P09026 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxb3P09026 Gm7367-201ENSMUST00000057611 492 ntBASIC19.33■□□□□ 0.68
Hoxb3P09026 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxb3P09026 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hoxb3P09026 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.32■□□□□ 0.68
Hoxb3P09026 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.32■□□□□ 0.68
Hoxb3P09026 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.32■□□□□ 0.68
Hoxb3P09026 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.32■□□□□ 0.68
Hoxb3P09026 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.32■□□□□ 0.68
Hoxb3P09026 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.32■□□□□ 0.68
Hoxb3P09026 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.32■□□□□ 0.68
Hoxb3P09026 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Hoxb3P09026 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxb3P09026 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxb3P09026 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxb3P09026 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.31■□□□□ 0.68
Hoxb3P09026 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.31■□□□□ 0.68
Hoxb3P09026 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxb3P09026 Gm9988-201ENSMUST00000069786 435 ntBASIC19.31■□□□□ 0.68
Hoxb3P09026 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Hoxb3P09026 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.31■□□□□ 0.68
Hoxb3P09026 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.31■□□□□ 0.68
Hoxb3P09026 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.31■□□□□ 0.68
Hoxb3P09026 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.3■□□□□ 0.68
Hoxb3P09026 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms