Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPNS1P04632 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.75■■□□□ 1.07
CAPNS1P04632 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.75■■□□□ 1.07
CAPNS1P04632 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPNS1P04632 CCDC92B-201ENST00000575506 885 ntBASIC21.75■■□□□ 1.07
CAPNS1P04632 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPNS1P04632 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPNS1P04632 TMEM191A-211ENST00000637163 1067 ntBASIC21.75■■□□□ 1.07
CAPNS1P04632 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CAPNS1P04632 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPNS1P04632 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPNS1P04632 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CAPNS1P04632 ECEL1P1-201ENST00000373592 1742 ntBASIC21.75■■□□□ 1.07
CAPNS1P04632 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CAPNS1P04632 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPNS1P04632 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPNS1P04632 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.74■■□□□ 1.07
CAPNS1P04632 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CAPNS1P04632 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPNS1P04632 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPNS1P04632 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPNS1P04632 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.74■■□□□ 1.07
CAPNS1P04632 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.74■■□□□ 1.07
CAPNS1P04632 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.74■■□□□ 1.07
CAPNS1P04632 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPNS1P04632 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPNS1P04632 AL358852.1-201ENST00000623174 1268 ntBASIC21.74■■□□□ 1.07
CAPNS1P04632 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPNS1P04632 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPNS1P04632 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPNS1P04632 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CAPNS1P04632 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPNS1P04632 AC009102.2-201ENST00000606772 1639 ntBASIC21.73■■□□□ 1.07
CAPNS1P04632 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPNS1P04632 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.73■■□□□ 1.07
CAPNS1P04632 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPNS1P04632 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.73■■□□□ 1.07
CAPNS1P04632 AC245100.8-202ENST00000629247 1058 ntBASIC21.73■■□□□ 1.07
CAPNS1P04632 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CAPNS1P04632 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPNS1P04632 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.73■■□□□ 1.07
CAPNS1P04632 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPNS1P04632 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPNS1P04632 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CAPNS1P04632 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPNS1P04632 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPNS1P04632 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CAPNS1P04632 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.72■■□□□ 1.07
CAPNS1P04632 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CAPNS1P04632 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPNS1P04632 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPNS1P04632 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPNS1P04632 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPNS1P04632 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CAPNS1P04632 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CAPNS1P04632 C1orf229-201ENST00000623686 2258 ntBASIC21.72■■□□□ 1.07
CAPNS1P04632 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CAPNS1P04632 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.72■■□□□ 1.07
CAPNS1P04632 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.72■■□□□ 1.07
CAPNS1P04632 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPNS1P04632 DUSP8P3-201ENST00000399571 1760 ntBASIC21.71■■□□□ 1.07
CAPNS1P04632 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CAPNS1P04632 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPNS1P04632 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CAPNS1P04632 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.71■■□□□ 1.07
CAPNS1P04632 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.71■■□□□ 1.07
CAPNS1P04632 AC241377.3-202ENST00000626088 1088 ntBASIC21.71■■□□□ 1.07
CAPNS1P04632 AC241585.3-202ENST00000628937 1088 ntBASIC21.71■■□□□ 1.07
CAPNS1P04632 AC066615.1-201ENST00000640911 628 ntBASIC21.71■■□□□ 1.07
CAPNS1P04632 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CAPNS1P04632 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CAPNS1P04632 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPNS1P04632 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CAPNS1P04632 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.7■■□□□ 1.07
CAPNS1P04632 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CAPNS1P04632 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CAPNS1P04632 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CAPNS1P04632 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPNS1P04632 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.7■■□□□ 1.06
CAPNS1P04632 MIR3181-201ENST00000578512 73 ntBASIC21.7■■□□□ 1.06
CAPNS1P04632 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPNS1P04632 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.7■■□□□ 1.06
CAPNS1P04632 GUSBP5-202ENST00000510805 1989 ntBASIC21.7■■□□□ 1.06
CAPNS1P04632 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CAPNS1P04632 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPNS1P04632 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CAPNS1P04632 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.7■■□□□ 1.06
CAPNS1P04632 C17orf82-201ENST00000623772 1530 ntBASIC21.7■■□□□ 1.06
CAPNS1P04632 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPNS1P04632 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPNS1P04632 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPNS1P04632 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPNS1P04632 AC006455.2-201ENST00000429931 906 ntBASIC21.69■■□□□ 1.06
CAPNS1P04632 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.69■■□□□ 1.06
CAPNS1P04632 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.69■■□□□ 1.06
CAPNS1P04632 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.69■■□□□ 1.06
CAPNS1P04632 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.69■■□□□ 1.06
CAPNS1P04632 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.69■■□□□ 1.06
CAPNS1P04632 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
CAPNS1P04632 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 397.2 ms