Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shisa8J3QNX5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Shisa8J3QNX5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Mir6236-201ENSMUST00000184437 123 ntBASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shisa8J3QNX5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa8J3QNX5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa8J3QNX5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa8J3QNX5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa8J3QNX5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa8J3QNX5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa8J3QNX5 Cap2-205ENSMUST00000225824 1634 ntBASIC17.68■□□□□ 0.42
Shisa8J3QNX5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Gm10232-201ENSMUST00000089221 720 ntBASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Rarb-207ENSMUST00000225921 2756 ntBASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Shisa8J3QNX5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa8J3QNX5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa8J3QNX5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa8J3QNX5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.65■□□□□ 0.42
Shisa8J3QNX5 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.65■□□□□ 0.42
Shisa8J3QNX5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.65■□□□□ 0.42
Shisa8J3QNX5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa8J3QNX5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa8J3QNX5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shisa8J3QNX5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Shisa8J3QNX5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.64■□□□□ 0.42
Shisa8J3QNX5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa8J3QNX5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa8J3QNX5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa8J3QNX5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Shisa8J3QNX5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa8J3QNX5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa8J3QNX5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa8J3QNX5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa8J3QNX5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms