Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV9A0A0B4J1U6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 AL512631.2-201ENST00000604634 923 ntBASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 AC241377.3-202ENST00000626088 1088 ntBASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 AC241585.3-202ENST00000628937 1088 ntBASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 AC245100.8-202ENST00000629247 1058 ntBASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV9A0A0B4J1U6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV9A0A0B4J1U6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBV9A0A0B4J1U6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV9A0A0B4J1U6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 AC009086.3-201ENST00000623486 1008 ntBASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRBV9A0A0B4J1U6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV9A0A0B4J1U6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV9A0A0B4J1U6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV9A0A0B4J1U6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV9A0A0B4J1U6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms